Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq6 165 2e-35
seq2 159 8e-34
>seq6
Length=935435
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||||||||| || || | ||| || || || || || |||||||||| |||||||| ||
Sbjct 585595 TCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 585654
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| || ||||||||||||||||| | || ||||||||| || ||||| ||||||||
Sbjct 585655 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 585714
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||||| || |||||| || ||||| || || || || || || ||||| |
Sbjct 585715 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 585774
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || ||||| || ||||| | |||||
Sbjct 585775 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||||||||| || || | ||| || || || || || |||||||||| |||||||| ||
Sbjct 585823 TCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 585882
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| || ||||||||||||||||| | || ||||||||| || ||||| ||||||||
Sbjct 585883 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 585942
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||||| || |||||| || ||||| || || || || || || ||||| |
Sbjct 585943 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586002
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || ||||| || ||||| | |||||
Sbjct 586003 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||||||||| || || | ||| || || || || || |||||||||| |||||||| ||
Sbjct 586051 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 586110
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| || ||||||||||||||||| | || ||||||||| || ||||| ||||||||
Sbjct 586111 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 586170
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||||| || |||||| || ||||| || || || || || || ||||| |
Sbjct 586171 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586230
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || ||||| || ||||| | |||||
Sbjct 586231 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||||||||| || || | ||| || || || || || |||||||||| |||||||| ||
Sbjct 586279 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 586338
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| || ||||||||||||||||| | || ||||||||| || ||||| ||||||||
Sbjct 586339 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 586398
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||||| || |||||| || ||||| || || || || || || ||||| |
Sbjct 586399 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586458
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || ||||| || ||||| | |||||
Sbjct 586459 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||||||||| || || | ||| || || || || || |||||||||| |||||||| ||
Sbjct 586507 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 586566
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| || ||||||||||||||||| | || ||||||||| || ||||| ||||||||
Sbjct 586567 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 586626
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||||| || |||||| || ||||| || || || || || || ||||| |
Sbjct 586627 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586686
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || ||||| || ||||| | |||||
Sbjct 586687 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||||||||| || || | ||| || || || || || |||||||||| |||||||| ||
Sbjct 586735 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 586794
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| || ||||||||||||||||| | || ||||||||| || ||||| ||||||||
Sbjct 586795 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 586854
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||||| || |||||| || ||||| || || || || || || ||||| |
Sbjct 586855 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586914
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || ||||| || ||||| | |||||
Sbjct 586915 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950
Score = 159 bits (176), Expect = 8e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||||||||| || || | ||| || || || || || |||||||||| |||||||| ||
Sbjct 586963 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 587022
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| || ||||||||||||||||| | || ||||||||| || ||||| ||||||||
Sbjct 587023 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 587082
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||||| || |||||| || ||||| || || || || || || ||||| |
Sbjct 587083 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 587142
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || ||||| || || || | |||||
Sbjct 587143 GGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178
>seq2
Length=1385486
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| | ||| | ||| |||||||| || ||||| || ||||| |||| | |||
Sbjct 975414 TCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGT 975473
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || ||||| | || ||||||||| || || || ||
Sbjct 975474 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 975533
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 975534 TTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAA 975593
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || |||||
Sbjct 975594 AGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 975626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480803946952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |