Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4 260 2e-64 seq7 194 2e-44 seq1 113 5e-20 >seq4 Length=1065440 Score = 260 bits (288), Expect = 2e-64 Identities = 600/893 (67%), Gaps = 33/893 (4%) Strand=Plus/Plus Query 18685 ACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCCATAAAATCAAAT 18744 ||||| ||||| || ||||| || || || | | || || ||||| ||||||||| Sbjct 810935 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 810994 Query 18745 GGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGTCTATCCGCTACA 18804 || || | || || | | ||| ||| || || | | ||||||||||| || || Sbjct 810995 GGGTTAGTCACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGACG 811054 Query 18805 AATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTAACAGGTAGTGCA 18864 || | || || |||||||| || ||||| || | ||| ||| ||||| ||| Sbjct 811055 AACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGCA 811114 Query 18865 TCTGT-AAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGATACAACTCT--- 18920 || | ||| | |||| ||| || | || || || | ||||| | | | | Sbjct 811115 TCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTCAGTAATAATCTTTTCGATAATGGA 811173 Query 18921 ---ATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATCACAATG 18977 |||| ||| | | || ||| ||| | | |||||||||||| ||| Sbjct 811174 AGGATCTGGCTTAT-----TCTTCAA-ATGAGCAAATAGTAGACATGCAAAATCGGTATG 811227 Query 18978 TAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCt 19037 || || || ||||| | |||||||| |||||||| |||| ||| ||||| || ||| | Sbjct 811228 TAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTT 811287 Query 19038 tttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGC 19097 || || |||||||| |||| |||||| || || |||||||| |||||||| | || || Sbjct 811288 CTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATGGCAGC 811347 Query 19098 AAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCA 19157 |||||||| | ||| ||| | | ||| ||| | | ||||||||| | | ||||| Sbjct 811348 GAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCA 811407 Query 19158 ATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGC-- 19215 || ||||||| ||| | || || | || || | ||| |||| | | || ||| Sbjct 811408 TTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATA-AGAAAT-CGCTT 811465 Query 19216 TCATCTGTATCTTTAACATATGCATCTATCAATAAACTG----TACATTTCTGAATGAAT 19271 || | || ||| || | ||| | ||||||| ||| | || | ||||| ||||| Sbjct 811466 TCCTTTGGATCCTTGATATAAG----TATCAATTAACAGGGAATAGGTCTCTGAGTGAAT 811521 Query 19272 ATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACT 19331 ||||| || || || || || || |||||| | ||||||| || || ||||| Sbjct 811522 GTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGC 811581 Query 19332 ACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAA 19391 || || | || || ||||| ||||| ||||| |||||| || ||||| || || || Sbjct 811582 ACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAA 811641 Query 19392 TACATGTTTAATAAAATGTTTTTC-ATCTGAGGTTAAT----GTATTCCAATCATTAATA 19446 ||| | || ||| | |||| ||| | || || |||||||||||| |||| Sbjct 811642 GACACGGGAGATGAAAAATCTTTCGTTCTCA--TTCATACGGTTATTCCAATCATGAATA 811699 Query 19447 TCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATG 19506 || || || | ||| | ||||| | ||||| || |||||||||||| | |||||| Sbjct 811700 TCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCT 811759 Query 19507 TTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559 | ||| || ||| | |||| || || |||| |||||||||| ||| || || Sbjct 811760 TGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTACGTTTGTTCTC 811812 >seq7 Length=810710 Score = 194 bits (214), Expect = 2e-44 Identities = 730/1133 (64%), Gaps = 39/1133 (3%) Strand=Plus/Plus Query 47956 ATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCA 48015 |||| || |||||||| || | || || | | ||||| || || |||||||||| Sbjct 327299 ATTTAATGGTACCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCA 327358 Query 48016 TAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT--AGC 48073 | || || || ||||| ||| | |||||||| | ||||| | ||| |||| | ||| Sbjct 327359 TGAATGGAGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCA--CAGTTTTTGAGC 327416 Query 48074 CTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTC 48133 || ||| |||| | | ||| |||| ||| || |||||||| Sbjct 327417 TTTGATAGTCTTTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTC 327476 Query 48134 ATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTC 48193 ||| ||||| |||| | || || ||| |||| | ||| | | ||| | ||| || | Sbjct 327477 ATCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACC 327536 Query 48194 ATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCT 48253 || | || || | |||| || | |||||| ||||| || ||| || ||||| || Sbjct 327537 ATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCT 327596 Query 48254 AGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGC 48313 | | | ||||| || || ||| | | || | || || | || || || Sbjct 327597 TGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGC 327656 Query 48314 ATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTAT 48373 ||||||||||| || || | || | ||||||| | ||| ||||| |||||||| | Sbjct 327657 GTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCAC 327716 Query 48374 ATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATT 48433 ||| | ||||| ||||| | || | || ||| |||| | || || || |||| || Sbjct 327717 ATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTT 327776 Query 48434 GGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACCAC 48492 || || | |||||| || ||| | || || || || || ||| ||||||| Sbjct 327777 AGTACCTGCAATATATGAACCCGTAGAACGAATGTTGTGTATGTGCAA-ACCAATACCAC 327835 Query 48493 CTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTAT 48552 | || | ||||| || | |||||| || | ||||| ||||| || || || | Sbjct 327836 CAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGT 327895 Query 48553 CATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAA 48612 |||| |||| | ||| ||||| |||||| || || | ||| || | ||| | Sbjct 327896 CATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGA 327955 Query 48613 ATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAA 48672 | | |||||||| |||||||| || || || || | || ||||| || |||||| Sbjct 327956 AAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAG 328015 Query 48673 CAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTC 48732 |||| || || || ||| ||||| | || || | ||| | ||||| |||||| | Sbjct 328016 CAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGAC 328075 Query 48733 TTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAA 48792 |||| | | || |||||| ||| ||||| || |||| ||||| || |||| Sbjct 328076 GTTCAGCGACTTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAA 328135 Query 48793 AATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATG 48850 ||||||| | ||||| || |||||| || ||| | || || | |||||||| Sbjct 328136 AATAGTTAAAGTTGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATG 328193 Query 48851 TTTATATACTACATCCATTACATTTTTTGATATAAT-------TGA------TTCCTT-- 48895 ||| | || | ||||| || | || || || || ||| ||| || Sbjct 328194 TTTGTTGACGATGTCCATAACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGG 328253 Query 48896 GTAAAGAT-CTTCTACAA--CA-TCACTA------AATAtttttt--ttGTTTCTTTATG 48943 || | || || |||| || |||| | || | | ||| | || | || || Sbjct 328254 GTTCACATAGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTG 328313 Query 48944 AAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACA 49003 | |||||| |||| ||||||||| || || |||||||||| ||||| | || || || Sbjct 328314 CAAATTAGAGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGT-CA 328372 Query 49004 TGTAC-TAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCT 49055 | ||| | | |||| || || || | || ||||| |||||| |||||| Sbjct 328373 TATACGCACAAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCT 328425 >seq1 Length=1424806 Score = 113 bits (124), Expect = 5e-20 Identities = 406/630 (64%), Gaps = 10/630 (2%) Strand=Plus/Plus Query 48116 ATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACA 48175 |||||| | |||||||| | || ||||||| || ||||| |||| |||| Sbjct 989095 ATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGGCCTCATCTGGACT 989154 Query 48176 CATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAG 48235 | ||| ||||||| ||| | || | |||| || | || |||||||| || Sbjct 989155 AAACAAACACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGTCAGGTATCCACAG 989214 Query 48236 AGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAG 48295 || | ||| | ||| || | ||| | |||||| || || ||| || ||| | || Sbjct 989215 CGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAG 989274 Query 48296 AAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTA-CACCTGGTCGTT 48354 ||| || | || || ||||||||||| || | ||||| ||| || | | || || | | Sbjct 989275 AAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATA-TGCAATAAGCTCCGGGCCTCT 989333 Query 48355 TATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAA 48414 | || || || ||||||| |||||| ||||| || || |||| | | |||||| || | Sbjct 989334 TGTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCA 989393 Query 48415 TACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA 48474 || | || | ||||||| | || || ||| ||| | | ||| || || || Sbjct 989394 AGCCGCTCGACACACCATTGCTACCTGATATAAGCGCCCCATTTGATCTAATGTTGGAAA 989453 Query 48475 TTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCAT 48534 || || |||||||||| ||| || || | || | | ||| || | Sbjct 989454 CATGAAGGCCAATACCACCTGAAGCTTTGGAAATCATGGCTGTCTTGTGAAGTGTCTTGA 989513 Query 48535 AAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGC-GGA 48593 |||| || |||||| || |||||||| | |||||||| |||| | | || Sbjct 989514 AAATACCATCTATAGAGTCCTCTATCATTCCCACAAGAAAACATGACGACAAGTACTGGT 989573 Query 48594 TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAAC 48653 | || || |||| ||| ||||| || || || |||||||| || | || ||| | Sbjct 989574 TCAC-TGTACCTGCATTGAATAAAGTCGGTGAGGCATGAATGAAATAGCGCTTTGACATT 989632 Query 48654 AATTTATATGTTTCAATAACAGAATCTATATCCCA------TTGATGTATACCTATAGAT 48707 | || ||| || || | || ||||| |||||| | | ||| || ||| || Sbjct 989633 AGTTCATAAGTCTCTACTACTGAATCAATATCCGAATATGGTCCATGAATCGCTAGAGCG 989692 Query 48708 ACACGCATTAACATATATTGAGGTCTTTCA 48737 || | ||| || | | |||||||| ||||| Sbjct 989693 ACTCTCATGAATAGAAATTGAGGTGTTTCA 989722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108406523840