Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq5 289 2e-72 seq10 230 2e-54 seq6 118 9e-21 seq1 109 4e-18 seq4 102 7e-16 >seq5 Length=957853 Score = 289 bits (320), Expect = 2e-72 Identities = 563/817 (69%), Gaps = 16/817 (2%) Strand=Plus/Plus Query 551781 GCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT-ATCATG 551839 ||||| ||| ||| |||| | ||||| |||||||| ||||| ||| | || | | Sbjct 676672 GCTACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTCGATAACAGATTAGTCAACCAC 676731 Query 551840 GTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGC-CAAAGCTC 551898 || | | | || || || |||| ||||| ||| ||| ||||| ||||| || Sbjct 676732 TTG-GCTAACGAGTTCAAGAGAAAGAACAAGAAGGAT--ATC-ACATCGAATCAAAGATC 676787 Query 551899 TTCGTC--GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCA 551956 || | | | || ||||| |||||||| || | ||||| || ||| |||| Sbjct 676788 TTTGAGAAGATTGAGGACTGCCGCTGAAAGAGCAAAGAGGGCTCTATCCTCTTCGTCTCA 676847 Query 551957 AACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAG 552016 ||| | |||||| | ||||| || ||||| || || |||| | || || | |||| Sbjct 676848 AACTTCCATTGAAATCGATTCTTTGTTTGAAGGTATCGATTTCTACACTTCTCTAACGAG 676907 Query 552017 GGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACA 552076 || | ||||||||| | ||| | || | |||||| || | || || || ||| | Sbjct 676908 AGCTAGATTTGAAGAGTTATGTGCAGACCAGTTTAGATCTACTTTGGACCCTGTTGAAAA 676967 Query 552077 AGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGG 552136 || || ||||| || || | || ||||| || | |||||||||| ||||||||||| Sbjct 676968 GGTCTTGAGAGACTCCAAATTGGACAAATCGCAAATCGATGAAATTGTTCTTGTTGGTGG 677027 Query 552137 ATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATT 552196 ||||| |||||||| || || | || || | || ||||| |||||| || Sbjct 677028 TTCTACGAGAATTCCAAAGATCCAAAAATTGGTCTCCGATTTCTTCAACGGTAAAGAACC 677087 Query 552197 AAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256 ||| | | |||| |||||||| ||||| || |||||||| || ||||||| ||||| Sbjct 677088 AAACAAGTCTATTAACCCAGATGAAGCTGTGGCTTATGGTGCTGCTGTTCAAGCTGCTAT 677147 Query 552257 TCTTTCTGG--ACAAACTGATGAAAAACT-ACAAAATATTGTACTTGTAGATGTTACTCC 552313 || | || || || | | ||| ||| | | |||||| || ||||||| |||| Sbjct 677148 CCTAACCGGTGACCAA-TCTTCAAAGACTCAGGACCTATTGTTATT--AGATGTTGCTCC 677204 Query 552314 TCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATAC 552373 ||| || || ||| | || || | || ||||| ||||| || | ||| |||||| | Sbjct 677205 TCTGTCCCTAGGTATTGAGACCGCAGGTGGTATCATGACCAAATTGATCCCAAGAAATTC 677264 Query 552374 TACTATTCCTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTG 552432 || |||||| || ||||| || | ||| || || || | ||||||||| ||| || Sbjct 677265 GACGATTCCTACCAAGAAATC-CGAGACTTTCTCCACTTACGCTGATAATCAACCTGGTG 677323 Query 552433 TTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTA 552492 | |||||| | || ||||| ||||||| | || || ||||| |||| | |||| Sbjct 677324 TCTTGATTCAAGTGTTCGAAGGTGAAAGAACAAAAACCAAGGATAACAATCTGTTGGGTA 677383 Query 552493 CTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTT 552552 || | | | ||||||||||||||||| | || || || ||||||||||| |||| Sbjct 677384 AATTCGAGCTGGCTGGTATTCCTCCTGCTCCAAGAGGTGTCCCACAAATTGAAGTCACTT 677443 Query 552553 TCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 ||||||||||||| ||||| || ||||| || |||| Sbjct 677444 TCGATATCGATGCAAATGGTATCTTGAACGTTTCTGC 677480 Score = 219 bits (242), Expect = 3e-51 Identities = 394/565 (70%), Gaps = 18/565 (3%) Strand=Plus/Plus Query 549969 AAGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTG 550028 |||| | ||||||||| |||| | ||||| ||||| || || ||||| |||| Sbjct 676010 AAGACAAAATGTCAAA------AGCTGTTGGTATCGATTTGGGTACTACATACTCATGTG 676063 Query 550029 TTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTA 550088 | | || ||||| | ||||||||||| || || ||||||||||||||||||| Sbjct 676064 TGGCCCATTTTTCAAATGATCGTGTTGAAATTATCGCTAACGATCAAGGTAACAGAACTA 676123 Query 550089 CTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATC 550148 | ||||| ||||| ||||||| || |||||| || |||||||||| ||||| | | Sbjct 676124 CCCCATCGTATGTGGCTTTCACTGATACTGAAAGGTTGATTGGTGATGCTGCAAAGAACC 676183 Query 550149 AAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTT 550208 | || || ||| ||| || ||| |||| || ||||| |||||||| || | | | Sbjct 676184 AGGCTGCTATTAACCCTCAAAACACTGTTTTCGACGCTAAGCGTTTAATCGGTCGTAAAT 676243 Query 550209 TTAATGAT--TCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGT 550266 || ||||| | | || | || ||| ||||||| |||||| | |||| ||| Sbjct 676244 TTGATGATCCTGAAGTGGTAAG--TGATGCTAAGCATTTCCCTTTCAAGGTTGTCAATAA 676301 Query 550267 TTCTGGAAAACCTTATATTGAAG-CTACTCATGAAGGATCTGTTAAACAATTTT-CACCA 550324 || ||||| || ||| | | | |||| | | || | |||| ||||| Sbjct 676302 GGAGGGCAAACCAGTGGTTCAAGTCGAGT--ACAAGGGTGAGACCAAGACTTTTACACCA 676359 Query 550325 GAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGT 550384 || ||||||| || |||||||| || |||||| | || | ||| || |||| Sbjct 676360 GAGGAAATTTCCTCCATGGTTTTGGGTAAGATGAAAGAGACCG-CAGAAGGGTTCTTGGG 676418 Query 550385 CAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 | | || | |||||| || | ||||| ||||| ||||| || || || ||| | || Sbjct 676419 TACTACTGTCAAGGATGCTGTTGTTACTGTTCCAGCTTATTTCAACGATTCTCAAAGACA 676478 Query 550444 AGCTACTAAAGATGCTGG-ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAAC 550502 |||||||||||||||||| ||| |||||||| | ||||| | ||||| || ||||||| Sbjct 676479 AGCTACTAAAGATGCTGGTACG-ATTGCTGGTTTGAATGTGTTGCGTATCATTAATGAAC 676537 Query 550503 CTACTGCTGCTGCACTTGCATATGG 550527 ||||||||||||| | ||||| || Sbjct 676538 CTACTGCTGCTGCTATCGCATACGG 676562 >seq10 Length=341133 Score = 230 bits (254), Expect = 2e-54 Identities = 470/687 (68%), Gaps = 26/687 (4%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||||| |||||||| || || || | || ||| | ||||||| || | ||| Sbjct 30242 AGAACTGCTTGTGAAAGAGCAAAGAGAACTTTGTCTTCTTCTGCTCAAACTTCTGTCGAA 30183 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | || || || | || || ||||||| | || || | | || || | ||| ||| Sbjct 30182 ATTGACTCCTTGTACGAAGGTATTGATTTCTACACTTCTCTAACCAGAGCTAGATTCGAA 30123 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| ||||| | || ||| || | || || || ||| | || || ||||| Sbjct 30122 GAATTGTGTGCTGATTTGTTCAGATCCACTTTGGACCCTGTTGAAAAGGTCTTGAGAGAC 30063 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 || ||| | || ||||| |||| || ||||| || | |||||||| ||||| |||||| Sbjct 30062 TCTAAGTTGGACAAATCTCAAGTTCACGAAATCGTCTTGGTTGGTGGTTCTACCAGAATT 30003 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAAAAATTAAATGAAAGT 552206 || || ||| ||| ||| | | || ||||| ||||| || ||| | Sbjct 30002 CCAAAGGTTC---AAAAGTTGGTTACCGATTTCTTCAACGGTAAGGAACCAAACAGATCC 29946 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG-- 552264 | || |||||||| |||||||| ||||||||||| ||||||| ||||| | ||| Sbjct 29945 ATCAACCCAGATGAAGCTGTTGCTTATGGTGCCGCTGTTCAAGCTGCTATCTTGACTGGT 29886 Query 552265 GACAAACTGATGAAAAACTACAAAA--TATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 ||| || | | || ||| ||| | |||||| ||| |||||| ||||||||||||| Sbjct 29885 GACCAA-TCTTCCAAGACT-CAAGATCTATTGTTGTTG--GATGTTGCTCCTCTATCTCT 29830 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | ||||| | ||| ||| | ||||| || | || ||||| |||||||||| Sbjct 29829 AGGTATTGAAACTGCTGGTGGTGTCATGACCAAGTTGATTCCAAGAAACTCTACTATTCC 29770 Query 552383 TTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 || || || || | ||| || || || | || || ||| | | ||| |||| Sbjct 29769 AACCAAGAAGTC-CGAGACTTTCTCCACTTACGCTGACAACCAACCAGGTGTCTTGATTC 29711 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT-----ACTTT 552496 || | |||||||| |||||| || || || || ||||||| | | || Sbjct 29710 AAGTCTTTGAAGGTGAAAGAGCTAGAACAAAGGACAA----CAACTTGTTGGGTAAGTTC 29655 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 |||| || |||||||| || ||||| | || || || ||||| |||||||| ||||| Sbjct 29654 GAATTGAG-TGGTATTCCACCAGCTCCAAGAGGTGTCCCACAAATCGAAGTTACCTTCGA 29596 Query 552557 TATCGATGCCAATGGAATTTTGAATGT 552583 | ||||| | || || || |||||||| Sbjct 29595 TGTCGATTCTAACGGTATCTTGAATGT 29569 Score = 206 bits (228), Expect = 2e-47 Identities = 374/543 (69%), Gaps = 12/543 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| ||||| || || || || ||||||| || |||| | Sbjct 31014 AGCTGTTGGTATCGATTTGGGTACTACTTACTCCTGTGTTGCCCATTTCTCCAATGATCG 30955 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||||||||||| ||||||||||||||||| ||||| |||| |||| | ||||| Sbjct 30954 TGTTGAAATTATTGCCAACGATCAAGGTAACAGAACCACTCCTTCTTTTGTTGCATTCAC 30895 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || |||||| || |||||||||| || || | ||||| || || || | ||| Sbjct 30894 TGACACTGAAAGATTGATTGGTGATGCTGCTAAGAACCAAGCTGCTATGAACCCAAGCAA 30835 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || |||| || ||||| ||||| || || |||| || | || | || || | Sbjct 30834 CACCGTTTTCGACGCTAAGCGTTTGATCGGTAGAAACTTCAGCGACCCAGAGGTGCAAGG 30775 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||||||||||| | || ||| | || || ||||| || || || | ||| ||| Sbjct 30774 TGATATGAAGCACTTCCCATTCAAGATCGTCGATGTTGAAGGTAAGCCACAAATTCAAGT 30715 Query 550291 TACTCATGAAGGATCTGTTAAAC-----AATTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | |||| || |||| | || | ||||||||||| || |||||||| Sbjct 30714 TGAATA-CAAGG----GTGAAACCAAGAAGTTCACTCCAGAACAAATCTCTTCTATGGTC 30660 Query 550346 TTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 || || ||||| |||| || || | || | ||| | | |||| |||||| || Sbjct 30659 TTGGGTAAGATGAAGGAAACTGCTGAGAG-TTACTTGGGTGACAACGTTAAGGATGCTGT 30601 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | ||||| ||||| ||||| || || || ||| | |||||||| ||||||||||| Sbjct 30600 TGTTACTGTTCCAGCTTATTTCAACGATTCTCAAAGACAAGCTACCAAAGATGCTGGTAC 30541 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| | || || | ||||| || || |||||||| |||||||| |||| || Sbjct 30540 CATTGCTGGTTTGAACGTCTTGCGTATCATTAACGAACCTACCGCTGCTGCCATTGCCTA 30481 Query 550525 TGG 550527 || Sbjct 30480 CGG 30478 >seq6 Length=935435 Score = 118 bits (130), Expect = 9e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | |||||||||| |||||| ||||| || || || || || | |||| Sbjct 585629 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 585688 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||| ||||| ||||||||||||||||| || || || ||||| ||| Sbjct 585689 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 585748 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | || | | || || || | ||||||||||| | ||| || ||||| || || Sbjct 585749 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 585807 Query 563472 CATA 563475 |||| Sbjct 585808 CATA 585811 Score = 118 bits (130), Expect = 9e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | |||||||||| |||||| ||||| || || || || || | |||| Sbjct 585857 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 585916 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||| ||||| ||||||||||||||||| || || || ||||| ||| Sbjct 585917 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 585976 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | || | | || || || | ||||||||||| | ||| || ||||| || || Sbjct 585977 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586035 Query 563472 CATA 563475 |||| Sbjct 586036 CATA 586039 Score = 118 bits (130), Expect = 9e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | |||||||||| |||||| ||||| || || || || || | |||| Sbjct 586085 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 586144 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||| ||||| ||||||||||||||||| || || || ||||| ||| Sbjct 586145 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 586204 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | || | | || || || | ||||||||||| | ||| || ||||| || || Sbjct 586205 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586263 Query 563472 CATA 563475 |||| Sbjct 586264 CATA 586267 Score = 118 bits (130), Expect = 9e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | |||||||||| |||||| ||||| || || || || || | |||| Sbjct 586313 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 586372 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||| ||||| ||||||||||||||||| || || || ||||| ||| Sbjct 586373 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 586432 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | || | | || || || | ||||||||||| | ||| || ||||| || || Sbjct 586433 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586491 Query 563472 CATA 563475 |||| Sbjct 586492 CATA 586495 Score = 118 bits (130), Expect = 9e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | |||||||||| |||||| ||||| || || || || || | |||| Sbjct 586541 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 586600 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||| ||||| ||||||||||||||||| || || || ||||| ||| Sbjct 586601 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 586660 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | || | | || || || | ||||||||||| | ||| || ||||| || || Sbjct 586661 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586719 Query 563472 CATA 563475 |||| Sbjct 586720 CATA 586723 Score = 118 bits (130), Expect = 9e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | |||||||||| |||||| ||||| || || || || || | |||| Sbjct 586769 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 586828 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||| ||||| ||||||||||||||||| || || || ||||| ||| Sbjct 586829 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 586888 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | || | | || || || | ||||||||||| | ||| || ||||| || || Sbjct 586889 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586947 Query 563472 CATA 563475 |||| Sbjct 586948 CATA 586951 Score = 116 bits (128), Expect = 3e-20 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | |||||||||| |||||| ||||| || || || || || | |||| Sbjct 586997 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 587056 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||| ||||| ||||||||||||||||| || || || ||||| ||| Sbjct 587057 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 587116 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | || | | || || || | ||||||||||| | ||| || || ||||| || Sbjct 587117 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTG 587175 Query 563472 CAT 563474 ||| Sbjct 587176 CAT 587178 >seq1 Length=1424806 Score = 109 bits (120), Expect = 4e-18 Identities = 318/482 (66%), Gaps = 12/482 (2%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| ||||| ||||| || |||||||||||| ||||||||||| ||| ||||||| Sbjct 139913 GTTGAGATTATCGCCAACGAGCAAGGTAACAGAGTTACTCCATCTTTCGTTGCTTTCACT 139972 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 | || | ||| | | ||||| || || || | || || || || || || Sbjct 139973 CCAGAAGAGAGATTGA-TCGGTGAAGCTGCCAAGAACCAGGCTGCTTTGAACCCAGAGAA 140031 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 |||| | || || ||||| ||||| || || ||| ||| |||| |||||||| Sbjct 140032 TACTGTCTTCGACGCTAAGCGTTTGATCGGTAGACGTTACGATGAAGAATCTGTTCAGAA 140091 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG- 550289 ||||||||| ||||||||| | | | |||| || || || |||| Sbjct 140092 CGATATGAAGACCTGGCCTTTCAAGGTCATCGATGTCGAGGGTTCTCCAGTCATCGAAGT 140151 Query 550290 -CTACTCATGAAGGATCTGTTA--AACAATTT-TCACCAGAACAAATTTCATCTATGGTT 550345 | | | || || || | || | ||| || ||| || |||| || |||||||| Sbjct 140152 CCAATACTTG--GG---TGAAACCAAGACTTTCTCCCCACAAGAAATCTCTGCTATGGTT 140206 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 || | || ||||| | | || ||| ||| |||| | ||| | || || Sbjct 140207 TTGACCAAGATGAAGGAGATTGCTGAGGCTAAGATTGCTCAAAAGGTTGAAAAGGCTGTT 140266 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || || || ||||| ||||| || || | ||| | |||||||| || |||||||| Sbjct 140267 ATCACCGTTCCAGCTTATTTCAACGATGCTCAAAGACAAGCTACCAAGGATGCTGGTTCC 140326 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || ||||| | || || | ||||||||||| ||||| || || ||||| |||| || Sbjct 140327 ATCGCTGGTTTGAACGTCTTGCGTATTATCAACGAACCAACCGCCGCTGCCATTGCTTAC 140386 Query 550526 GG 550527 || Sbjct 140387 GG 140388 Score = 104 bits (114), Expect = 2e-16 Identities = 236/351 (67%), Gaps = 8/351 (2%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||| |||||||| || || || | || |||| ||||||||||||| | ||| Sbjct 140630 AGAACTGCTGCTGAAAGAGCTAAGAGAACTTTGTCCTCTGTTACTCAAACCACTGTCGAA 140689 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 || || || || || || || |||| | || |||| | || || | ||| ||| Sbjct 140690 GTCGACTCCTTGTTCGACGGTGAAGATTTCGAAACTTCTATCACCAGAGCTAGATTCGAA 140749 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATT--GAACCAGTAGAACAAGTTTTAAGAG 552087 | | ||| || |||||| ||| || || |||||||| |||||||| || | | Sbjct 140750 G--ACTTGAACTCTGCTCTTTTCAAATCCACTTTGGAACCAGTTGAACAAGTCTTGAAGG 140807 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 | | ||||| || || || | | ||| |||| | |||||||| || || |||| Sbjct 140808 ACGCTAAGATCTCCAAGTCTCAAATCGACGAAGTTGTCTTGGTTGGTGGTTCCACTAGAA 140867 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTC--TTATTTCAATGGTAAAAAATTAAATGAAAG 552205 |||| || | | || |||| || | | ||| | ||||| |||| | || Sbjct 140868 TTCCAAAGGTCCAAAAATTGTT--GTCCGACTTCTTCGAAGGTAAGCAATTGGAGAAATC 140925 Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256 | |||| |||||||| || || || || ||||| || |||||| ||||| Sbjct 140926 TATTAACCCAGATGAAGCCGTCGCTTACGGTGCTGCTGTTCAAGGTGCTAT 140976 >seq4 Length=1065440 Score = 102 bits (112), Expect = 7e-16 Identities = 419/647 (65%), Gaps = 28/647 (4%) Strand=Plus/Minus Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 ||||||| | ||||| || | || || |||||| | | || | | || ||||| Sbjct 699917 TATTGAAATCGATTCTTTTGTCGATGGTATTGATCTAAGTGAAACTTTGACTAGAGCCAA 699858 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACA-ATTGAA-CCAGTAGAACAAGTT 552080 |||||| | | ||| || | ||||| ||||| | ||||| ||||| || | || Sbjct 699857 ATTTGAGG--AATTGAACTTAGATCTTTTCAAAAAGACTTTGAACCCAGTTGAGAAGGTC 699800 Query 552081 TTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCT 552140 || |||||| | ||||||| || | | || ||||| ||||| ||||| || Sbjct 699799 TTGGAAGATTCTGGGCTTGATAAGAAGGAAATTGACGACATTGTTCTTGTGGGTGGTTCA 699740 Query 552141 ACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAA--TTAA 552198 || |||||||| || ||| || | || |||| || | ||||| ||| || Sbjct 699739 ACTAGAATTCCAAAGGTTCAACAACTATTGGAATCTTTCTTTGACGGTAAGAAAGCTTCC 699680 Query 552199 ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 | | || ||||||| ||||| ||||| || | ||||| ||| | ||||||| | ||| Sbjct 699679 A--AGGGTATTAATCCTGATGAAGCTGTGGCTTTCGGTGCTGCAGTGCAAGCAGGTGTTC 699622 Query 552259 TTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTACT-CCTCT 552316 | ||| || || || | || ||||||| |||| |||| || | | ||| Sbjct 699621 TAAGTGGTGAAGATGGTG------TTGAAGATATTGT-CTTGTTAGACGTCAATGCCTTG 699569 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 | || | ||| ||||||| ||| ||| | ||||| | | ||| | |||||||| | Sbjct 699568 ACCT-TGGGTATAGAAACTACTGGTGGTGTCATGACCTCTTTAATCAAGAGAAATACCGC 699510 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTAC-GTATTCAGATAATCAAACTGCTGTTA 552435 ||| || || || || | | || || || | | || || || || | |||| | Sbjct 699509 TATCCCAACAAAGAAGTCCCAGATTTTCTCCACTGCAGTC-GACAACCAGCCAACTGTCA 699451 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGT 552491 ||| | ||| |||||| |||||| | || ||||| |||||| ||| Sbjct 699450 TGATTAAGGTTTATGAAGGTGAAAGAGCCATGGTCAAGGATAA----CAACTTGTTGGGT 699395 Query 552492 ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACT 552551 | || | || |||||| || |||||||| | || || || ||||| || || ||| Sbjct 699394 AACTTCGAGTTGACAGGTATCCCACCTGCTCCAAGAGGTGTTCCACAAATCGAGGTCACT 699335 Query 552552 TTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||| | || || ||||| ||| | || || ||||| ||||| Sbjct 699334 TTCGCCTTAGACGCAAATGGTATTCTAAAGGTCTCTGCTACCGATAA 699288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293038467440