Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq5 289 2e-72
seq10 230 2e-54
seq6 118 9e-21
seq1 109 4e-18
seq4 102 7e-16
>seq5
Length=957853
Score = 289 bits (320), Expect = 2e-72
Identities = 563/817 (69%), Gaps = 16/817 (2%)
Strand=Plus/Plus
Query 551781 GCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT-ATCATG 551839
||||| ||| ||| |||| | ||||| |||||||| ||||| ||| | || | |
Sbjct 676672 GCTACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTCGATAACAGATTAGTCAACCAC 676731
Query 551840 GTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGC-CAAAGCTC 551898
|| | | | || || || |||| ||||| ||| ||| ||||| ||||| ||
Sbjct 676732 TTG-GCTAACGAGTTCAAGAGAAAGAACAAGAAGGAT--ATC-ACATCGAATCAAAGATC 676787
Query 551899 TTCGTC--GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCA 551956
|| | | | || ||||| |||||||| || | ||||| || ||| ||||
Sbjct 676788 TTTGAGAAGATTGAGGACTGCCGCTGAAAGAGCAAAGAGGGCTCTATCCTCTTCGTCTCA 676847
Query 551957 AACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAG 552016
||| | |||||| | ||||| || ||||| || || |||| | || || | ||||
Sbjct 676848 AACTTCCATTGAAATCGATTCTTTGTTTGAAGGTATCGATTTCTACACTTCTCTAACGAG 676907
Query 552017 GGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACA 552076
|| | ||||||||| | ||| | || | |||||| || | || || || ||| |
Sbjct 676908 AGCTAGATTTGAAGAGTTATGTGCAGACCAGTTTAGATCTACTTTGGACCCTGTTGAAAA 676967
Query 552077 AGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGG 552136
|| || ||||| || || | || ||||| || | |||||||||| |||||||||||
Sbjct 676968 GGTCTTGAGAGACTCCAAATTGGACAAATCGCAAATCGATGAAATTGTTCTTGTTGGTGG 677027
Query 552137 ATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATT 552196
||||| |||||||| || || | || || | || ||||| |||||| ||
Sbjct 677028 TTCTACGAGAATTCCAAAGATCCAAAAATTGGTCTCCGATTTCTTCAACGGTAAAGAACC 677087
Query 552197 AAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256
||| | | |||| |||||||| ||||| || |||||||| || ||||||| |||||
Sbjct 677088 AAACAAGTCTATTAACCCAGATGAAGCTGTGGCTTATGGTGCTGCTGTTCAAGCTGCTAT 677147
Query 552257 TCTTTCTGG--ACAAACTGATGAAAAACT-ACAAAATATTGTACTTGTAGATGTTACTCC 552313
|| | || || || | | ||| ||| | | |||||| || ||||||| ||||
Sbjct 677148 CCTAACCGGTGACCAA-TCTTCAAAGACTCAGGACCTATTGTTATT--AGATGTTGCTCC 677204
Query 552314 TCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATAC 552373
||| || || ||| | || || | || ||||| ||||| || | ||| |||||| |
Sbjct 677205 TCTGTCCCTAGGTATTGAGACCGCAGGTGGTATCATGACCAAATTGATCCCAAGAAATTC 677264
Query 552374 TACTATTCCTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTG 552432
|| |||||| || ||||| || | ||| || || || | ||||||||| ||| ||
Sbjct 677265 GACGATTCCTACCAAGAAATC-CGAGACTTTCTCCACTTACGCTGATAATCAACCTGGTG 677323
Query 552433 TTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTA 552492
| |||||| | || ||||| ||||||| | || || ||||| |||| | ||||
Sbjct 677324 TCTTGATTCAAGTGTTCGAAGGTGAAAGAACAAAAACCAAGGATAACAATCTGTTGGGTA 677383
Query 552493 CTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTT 552552
|| | | | ||||||||||||||||| | || || || ||||||||||| ||||
Sbjct 677384 AATTCGAGCTGGCTGGTATTCCTCCTGCTCCAAGAGGTGTCCCACAAATTGAAGTCACTT 677443
Query 552553 TCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589
||||||||||||| ||||| || ||||| || ||||
Sbjct 677444 TCGATATCGATGCAAATGGTATCTTGAACGTTTCTGC 677480
Score = 219 bits (242), Expect = 3e-51
Identities = 394/565 (70%), Gaps = 18/565 (3%)
Strand=Plus/Plus
Query 549969 AAGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTG 550028
|||| | ||||||||| |||| | ||||| ||||| || || ||||| ||||
Sbjct 676010 AAGACAAAATGTCAAA------AGCTGTTGGTATCGATTTGGGTACTACATACTCATGTG 676063
Query 550029 TTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTA 550088
| | || ||||| | ||||||||||| || || |||||||||||||||||||
Sbjct 676064 TGGCCCATTTTTCAAATGATCGTGTTGAAATTATCGCTAACGATCAAGGTAACAGAACTA 676123
Query 550089 CTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATC 550148
| ||||| ||||| ||||||| || |||||| || |||||||||| ||||| | |
Sbjct 676124 CCCCATCGTATGTGGCTTTCACTGATACTGAAAGGTTGATTGGTGATGCTGCAAAGAACC 676183
Query 550149 AAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTT 550208
| || || ||| ||| || ||| |||| || ||||| |||||||| || | | |
Sbjct 676184 AGGCTGCTATTAACCCTCAAAACACTGTTTTCGACGCTAAGCGTTTAATCGGTCGTAAAT 676243
Query 550209 TTAATGAT--TCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGT 550266
|| ||||| | | || | || ||| ||||||| |||||| | |||| |||
Sbjct 676244 TTGATGATCCTGAAGTGGTAAG--TGATGCTAAGCATTTCCCTTTCAAGGTTGTCAATAA 676301
Query 550267 TTCTGGAAAACCTTATATTGAAG-CTACTCATGAAGGATCTGTTAAACAATTTT-CACCA 550324
|| ||||| || ||| | | | |||| | | || | |||| |||||
Sbjct 676302 GGAGGGCAAACCAGTGGTTCAAGTCGAGT--ACAAGGGTGAGACCAAGACTTTTACACCA 676359
Query 550325 GAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGT 550384
|| ||||||| || |||||||| || |||||| | || | ||| || ||||
Sbjct 676360 GAGGAAATTTCCTCCATGGTTTTGGGTAAGATGAAAGAGACCG-CAGAAGGGTTCTTGGG 676418
Query 550385 CAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443
| | || | |||||| || | ||||| ||||| ||||| || || || ||| | ||
Sbjct 676419 TACTACTGTCAAGGATGCTGTTGTTACTGTTCCAGCTTATTTCAACGATTCTCAAAGACA 676478
Query 550444 AGCTACTAAAGATGCTGG-ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAAC 550502
|||||||||||||||||| ||| |||||||| | ||||| | ||||| || |||||||
Sbjct 676479 AGCTACTAAAGATGCTGGTACG-ATTGCTGGTTTGAATGTGTTGCGTATCATTAATGAAC 676537
Query 550503 CTACTGCTGCTGCACTTGCATATGG 550527
||||||||||||| | ||||| ||
Sbjct 676538 CTACTGCTGCTGCTATCGCATACGG 676562
>seq10
Length=341133
Score = 230 bits (254), Expect = 2e-54
Identities = 470/687 (68%), Gaps = 26/687 (4%)
Strand=Plus/Minus
Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969
||||||||||| |||||||| || || || | || ||| | ||||||| || | |||
Sbjct 30242 AGAACTGCTTGTGAAAGAGCAAAGAGAACTTTGTCTTCTTCTGCTCAAACTTCTGTCGAA 30183
Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029
| || || || | || || ||||||| | || || | | || || | ||| |||
Sbjct 30182 ATTGACTCCTTGTACGAAGGTATTGATTTCTACACTTCTCTAACCAGAGCTAGATTCGAA 30123
Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089
|| | ||| ||||| | || ||| || | || || || ||| | || || |||||
Sbjct 30122 GAATTGTGTGCTGATTTGTTCAGATCCACTTTGGACCCTGTTGAAAAGGTCTTGAGAGAC 30063
Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149
|| ||| | || ||||| |||| || ||||| || | |||||||| ||||| ||||||
Sbjct 30062 TCTAAGTTGGACAAATCTCAAGTTCACGAAATCGTCTTGGTTGGTGGTTCTACCAGAATT 30003
Query 552150 CCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAAAAATTAAATGAAAGT 552206
|| || ||| ||| ||| | | || ||||| ||||| || ||| |
Sbjct 30002 CCAAAGGTTC---AAAAGTTGGTTACCGATTTCTTCAACGGTAAGGAACCAAACAGATCC 29946
Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG-- 552264
| || |||||||| |||||||| ||||||||||| ||||||| ||||| | |||
Sbjct 29945 ATCAACCCAGATGAAGCTGTTGCTTATGGTGCCGCTGTTCAAGCTGCTATCTTGACTGGT 29886
Query 552265 GACAAACTGATGAAAAACTACAAAA--TATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322
||| || | | || ||| ||| | |||||| ||| |||||| |||||||||||||
Sbjct 29885 GACCAA-TCTTCCAAGACT-CAAGATCTATTGTTGTTG--GATGTTGCTCCTCTATCTCT 29830
Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382
||| | ||||| | ||| ||| | ||||| || | || ||||| ||||||||||
Sbjct 29829 AGGTATTGAAACTGCTGGTGGTGTCATGACCAAGTTGATTCCAAGAAACTCTACTATTCC 29770
Query 552383 TTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441
|| || || || | ||| || || || | || || ||| | | ||| ||||
Sbjct 29769 AACCAAGAAGTC-CGAGACTTTCTCCACTTACGCTGACAACCAACCAGGTGTCTTGATTC 29711
Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT-----ACTTT 552496
|| | |||||||| |||||| || || || || ||||||| | | ||
Sbjct 29710 AAGTCTTTGAAGGTGAAAGAGCTAGAACAAAGGACAA----CAACTTGTTGGGTAAGTTC 29655
Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556
|||| || |||||||| || ||||| | || || || ||||| |||||||| |||||
Sbjct 29654 GAATTGAG-TGGTATTCCACCAGCTCCAAGAGGTGTCCCACAAATCGAAGTTACCTTCGA 29596
Query 552557 TATCGATGCCAATGGAATTTTGAATGT 552583
| ||||| | || || || ||||||||
Sbjct 29595 TGTCGATTCTAACGGTATCTTGAATGT 29569
Score = 206 bits (228), Expect = 2e-47
Identities = 374/543 (69%), Gaps = 12/543 (2%)
Strand=Plus/Minus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
|||| | ||||| ||||| || || || || ||||||| || |||| |
Sbjct 31014 AGCTGTTGGTATCGATTTGGGTACTACTTACTCCTGTGTTGCCCATTTCTCCAATGATCG 30955
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
||||||||||||||||| ||||||||||||||||| ||||| |||| |||| | |||||
Sbjct 30954 TGTTGAAATTATTGCCAACGATCAAGGTAACAGAACCACTCCTTCTTTTGTTGCATTCAC 30895
Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170
|| |||||| || |||||||||| || || | ||||| || || || | |||
Sbjct 30894 TGACACTGAAAGATTGATTGGTGATGCTGCTAAGAACCAAGCTGCTATGAACCCAAGCAA 30835
Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230
|| |||| || ||||| ||||| || || |||| || | || | || || |
Sbjct 30834 CACCGTTTTCGACGCTAAGCGTTTGATCGGTAGAAACTTCAGCGACCCAGAGGTGCAAGG 30775
Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290
||||||||||| | || ||| | || || ||||| || || || | ||| |||
Sbjct 30774 TGATATGAAGCACTTCCCATTCAAGATCGTCGATGTTGAAGGTAAGCCACAAATTCAAGT 30715
Query 550291 TACTCATGAAGGATCTGTTAAAC-----AATTTTCACCAGAACAAATTTCATCTATGGTT 550345
| | |||| || |||| | || | ||||||||||| || ||||||||
Sbjct 30714 TGAATA-CAAGG----GTGAAACCAAGAAGTTCACTCCAGAACAAATCTCTTCTATGGTC 30660
Query 550346 TTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404
|| || ||||| |||| || || | || | ||| | | |||| |||||| ||
Sbjct 30659 TTGGGTAAGATGAAGGAAACTGCTGAGAG-TTACTTGGGTGACAACGTTAAGGATGCTGT 30601
Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464
| ||||| ||||| ||||| || || || ||| | |||||||| |||||||||||
Sbjct 30600 TGTTACTGTTCCAGCTTATTTCAACGATTCTCAAAGACAAGCTACCAAAGATGCTGGTAC 30541
Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524
|||||||| | || || | ||||| || || |||||||| |||||||| |||| ||
Sbjct 30540 CATTGCTGGTTTGAACGTCTTGCGTATCATTAACGAACCTACCGCTGCTGCCATTGCCTA 30481
Query 550525 TGG 550527
||
Sbjct 30480 CGG 30478
>seq6
Length=935435
Score = 118 bits (130), Expect = 9e-21
Identities = 138/184 (75%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| |||||||| | |||||||||| |||||| ||||| || || || || || | ||||
Sbjct 585629 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 585688
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|| || ||||| ||||| ||||||||||||||||| || || || ||||| |||
Sbjct 585689 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 585748
Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| | || | | || || || | ||||||||||| | ||| || ||||| || ||
Sbjct 585749 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 585807
Query 563472 CATA 563475
||||
Sbjct 585808 CATA 585811
Score = 118 bits (130), Expect = 9e-21
Identities = 138/184 (75%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| |||||||| | |||||||||| |||||| ||||| || || || || || | ||||
Sbjct 585857 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 585916
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|| || ||||| ||||| ||||||||||||||||| || || || ||||| |||
Sbjct 585917 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 585976
Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| | || | | || || || | ||||||||||| | ||| || ||||| || ||
Sbjct 585977 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586035
Query 563472 CATA 563475
||||
Sbjct 586036 CATA 586039
Score = 118 bits (130), Expect = 9e-21
Identities = 138/184 (75%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| |||||||| | |||||||||| |||||| ||||| || || || || || | ||||
Sbjct 586085 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 586144
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|| || ||||| ||||| ||||||||||||||||| || || || ||||| |||
Sbjct 586145 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 586204
Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| | || | | || || || | ||||||||||| | ||| || ||||| || ||
Sbjct 586205 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586263
Query 563472 CATA 563475
||||
Sbjct 586264 CATA 586267
Score = 118 bits (130), Expect = 9e-21
Identities = 138/184 (75%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| |||||||| | |||||||||| |||||| ||||| || || || || || | ||||
Sbjct 586313 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 586372
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|| || ||||| ||||| ||||||||||||||||| || || || ||||| |||
Sbjct 586373 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 586432
Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| | || | | || || || | ||||||||||| | ||| || ||||| || ||
Sbjct 586433 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586491
Query 563472 CATA 563475
||||
Sbjct 586492 CATA 586495
Score = 118 bits (130), Expect = 9e-21
Identities = 138/184 (75%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| |||||||| | |||||||||| |||||| ||||| || || || || || | ||||
Sbjct 586541 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 586600
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|| || ||||| ||||| ||||||||||||||||| || || || ||||| |||
Sbjct 586601 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 586660
Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| | || | | || || || | ||||||||||| | ||| || ||||| || ||
Sbjct 586661 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586719
Query 563472 CATA 563475
||||
Sbjct 586720 CATA 586723
Score = 118 bits (130), Expect = 9e-21
Identities = 138/184 (75%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| |||||||| | |||||||||| |||||| ||||| || || || || || | ||||
Sbjct 586769 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 586828
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|| || ||||| ||||| ||||||||||||||||| || || || ||||| |||
Sbjct 586829 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 586888
Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| | || | | || || || | ||||||||||| | ||| || ||||| || ||
Sbjct 586889 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTG 586947
Query 563472 CATA 563475
||||
Sbjct 586948 CATA 586951
Score = 116 bits (128), Expect = 3e-20
Identities = 137/183 (75%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| |||||||| | |||||||||| |||||| ||||| || || || || || | ||||
Sbjct 586997 ATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTT 587056
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|| || ||||| ||||| ||||||||||||||||| || || || ||||| |||
Sbjct 587057 TGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTA 587116
Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| | || | | || || || | ||||||||||| | ||| || || ||||| ||
Sbjct 587117 TCAGAG-GACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTG 587175
Query 563472 CAT 563474
|||
Sbjct 587176 CAT 587178
>seq1
Length=1424806
Score = 109 bits (120), Expect = 4e-18
Identities = 318/482 (66%), Gaps = 12/482 (2%)
Strand=Plus/Plus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| ||||| ||||| || |||||||||||| ||||||||||| ||| |||||||
Sbjct 139913 GTTGAGATTATCGCCAACGAGCAAGGTAACAGAGTTACTCCATCTTTCGTTGCTTTCACT 139972
Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170
| || | ||| | | ||||| || || || | || || || || || ||
Sbjct 139973 CCAGAAGAGAGATTGA-TCGGTGAAGCTGCCAAGAACCAGGCTGCTTTGAACCCAGAGAA 140031
Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230
|||| | || || ||||| ||||| || || ||| ||| |||| ||||||||
Sbjct 140032 TACTGTCTTCGACGCTAAGCGTTTGATCGGTAGACGTTACGATGAAGAATCTGTTCAGAA 140091
Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG- 550289
||||||||| ||||||||| | | | |||| || || || ||||
Sbjct 140092 CGATATGAAGACCTGGCCTTTCAAGGTCATCGATGTCGAGGGTTCTCCAGTCATCGAAGT 140151
Query 550290 -CTACTCATGAAGGATCTGTTA--AACAATTT-TCACCAGAACAAATTTCATCTATGGTT 550345
| | | || || || | || | ||| || ||| || |||| || ||||||||
Sbjct 140152 CCAATACTTG--GG---TGAAACCAAGACTTTCTCCCCACAAGAAATCTCTGCTATGGTT 140206
Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405
|| | || ||||| | | || ||| ||| |||| | ||| | || ||
Sbjct 140207 TTGACCAAGATGAAGGAGATTGCTGAGGCTAAGATTGCTCAAAAGGTTGAAAAGGCTGTT 140266
Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465
|| || || ||||| ||||| || || | ||| | |||||||| || ||||||||
Sbjct 140267 ATCACCGTTCCAGCTTATTTCAACGATGCTCAAAGACAAGCTACCAAGGATGCTGGTTCC 140326
Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525
|| ||||| | || || | ||||||||||| ||||| || || ||||| |||| ||
Sbjct 140327 ATCGCTGGTTTGAACGTCTTGCGTATTATCAACGAACCAACCGCCGCTGCCATTGCTTAC 140386
Query 550526 GG 550527
||
Sbjct 140387 GG 140388
Score = 104 bits (114), Expect = 2e-16
Identities = 236/351 (67%), Gaps = 8/351 (2%)
Strand=Plus/Plus
Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969
||||||||| |||||||| || || || | || |||| ||||||||||||| | |||
Sbjct 140630 AGAACTGCTGCTGAAAGAGCTAAGAGAACTTTGTCCTCTGTTACTCAAACCACTGTCGAA 140689
Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029
|| || || || || || || |||| | || |||| | || || | ||| |||
Sbjct 140690 GTCGACTCCTTGTTCGACGGTGAAGATTTCGAAACTTCTATCACCAGAGCTAGATTCGAA 140749
Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATT--GAACCAGTAGAACAAGTTTTAAGAG 552087
| | ||| || |||||| ||| || || |||||||| |||||||| || | |
Sbjct 140750 G--ACTTGAACTCTGCTCTTTTCAAATCCACTTTGGAACCAGTTGAACAAGTCTTGAAGG 140807
Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147
| | ||||| || || || | | ||| |||| | |||||||| || || ||||
Sbjct 140808 ACGCTAAGATCTCCAAGTCTCAAATCGACGAAGTTGTCTTGGTTGGTGGTTCCACTAGAA 140867
Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTC--TTATTTCAATGGTAAAAAATTAAATGAAAG 552205
|||| || | | || |||| || | | ||| | ||||| |||| | ||
Sbjct 140868 TTCCAAAGGTCCAAAAATTGTT--GTCCGACTTCTTCGAAGGTAAGCAATTGGAGAAATC 140925
Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256
| |||| |||||||| || || || || ||||| || |||||| |||||
Sbjct 140926 TATTAACCCAGATGAAGCCGTCGCTTACGGTGCTGCTGTTCAAGGTGCTAT 140976
>seq4
Length=1065440
Score = 102 bits (112), Expect = 7e-16
Identities = 419/647 (65%), Gaps = 28/647 (4%)
Strand=Plus/Minus
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||||| | ||||| || | || || |||||| | | || | | || |||||
Sbjct 699917 TATTGAAATCGATTCTTTTGTCGATGGTATTGATCTAAGTGAAACTTTGACTAGAGCCAA 699858
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACA-ATTGAA-CCAGTAGAACAAGTT 552080
|||||| | | ||| || | ||||| ||||| | ||||| ||||| || | ||
Sbjct 699857 ATTTGAGG--AATTGAACTTAGATCTTTTCAAAAAGACTTTGAACCCAGTTGAGAAGGTC 699800
Query 552081 TTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCT 552140
|| |||||| | ||||||| || | | || ||||| ||||| ||||| ||
Sbjct 699799 TTGGAAGATTCTGGGCTTGATAAGAAGGAAATTGACGACATTGTTCTTGTGGGTGGTTCA 699740
Query 552141 ACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAA--TTAA 552198
|| |||||||| || ||| || | || |||| || | ||||| ||| ||
Sbjct 699739 ACTAGAATTCCAAAGGTTCAACAACTATTGGAATCTTTCTTTGACGGTAAGAAAGCTTCC 699680
Query 552199 ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258
| | || ||||||| ||||| ||||| || | ||||| ||| | ||||||| | |||
Sbjct 699679 A--AGGGTATTAATCCTGATGAAGCTGTGGCTTTCGGTGCTGCAGTGCAAGCAGGTGTTC 699622
Query 552259 TTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTACT-CCTCT 552316
| ||| || || || | || ||||||| |||| |||| || | | |||
Sbjct 699621 TAAGTGGTGAAGATGGTG------TTGAAGATATTGT-CTTGTTAGACGTCAATGCCTTG 699569
Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376
| || | ||| ||||||| ||| ||| | ||||| | | ||| | |||||||| |
Sbjct 699568 ACCT-TGGGTATAGAAACTACTGGTGGTGTCATGACCTCTTTAATCAAGAGAAATACCGC 699510
Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTAC-GTATTCAGATAATCAAACTGCTGTTA 552435
||| || || || || | | || || || | | || || || || | |||| |
Sbjct 699509 TATCCCAACAAAGAAGTCCCAGATTTTCTCCACTGCAGTC-GACAACCAGCCAACTGTCA 699451
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGT 552491
||| | ||| |||||| |||||| | || ||||| |||||| |||
Sbjct 699450 TGATTAAGGTTTATGAAGGTGAAAGAGCCATGGTCAAGGATAA----CAACTTGTTGGGT 699395
Query 552492 ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACT 552551
| || | || |||||| || |||||||| | || || || ||||| || || |||
Sbjct 699394 AACTTCGAGTTGACAGGTATCCCACCTGCTCCAAGAGGTGTTCCACAAATCGAGGTCACT 699335
Query 552552 TTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598
|||| | || || ||||| ||| | || || ||||| |||||
Sbjct 699334 TTCGCCTTAGACGCAAATGGTATTCTAAAGGTCTCTGCTACCGATAA 699288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029293038467440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |