Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq7 140 2e-28 seq1 127 1e-24 >seq7 Length=810710 Score = 140 bits (154), Expect = 2e-28 Identities = 428/656 (65%), Gaps = 17/656 (3%) Strand=Plus/Plus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| |||| ||| ||| ||| |||| | | ||| | ||| || |||||||||| Sbjct 327512 TTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAA 327571 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 |||| | || || |||||||| || | || ||||| || ||||| ||||| | Sbjct 327572 TCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGA 327631 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||||| ||||||||| || |||| |||||||||||| || || | ||| ||| |||| Sbjct 327632 TATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTG 327691 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 ||||| ||||||||||| || || | ||||| | ||||| || | ||| | Sbjct 327692 GCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGG 327751 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189 | | || || | ||| ||||| || | ||| | || || || || | ||| | Sbjct 327752 GGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGT 327811 Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAAC 26247 ||| || | ||| || |||||||| || ||||| ||||| || | ||| Sbjct 327812 TGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAA- 327870 Query 26248 TGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAA 26307 |||||| |||| || | ||| ||| | ||||| | | || ||||| ||||| | Sbjct 327871 -GTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACAT 327929 Query 26308 TTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTC 26367 || | | | || || | ||| || | || || | ||||||| | | |||| || Sbjct 327930 CTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATC--TC 327987 Query 26368 ACTCAAAGCTG--TATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATA 26425 | | | | | ||||||| |||| | | ||||| | || | | || ||| | Sbjct 327988 AAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACA 328047 Query 26426 GCTGTTCTTAACCACATATATTGAGGTCGTTCA---ATTACATTATTTTCCGCATCTCTA 26482 || ||| | ||||| |||||| |||||| | | || |||| ||| || Sbjct 328048 GCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCATTT-----ATC-CTC 328101 Query 26483 ATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCT 26538 | || |||||| || | |||||| || |||||||| | | ||||||||||| Sbjct 328102 AGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTTGAAATCTCT 328157 >seq1 Length=1424806 Score = 127 bits (140), Expect = 1e-24 Identities = 322/481 (67%), Gaps = 14/481 (3%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 || ||||| || ||| |||||| |||| ||| || | ||| || | || || Sbjct 989146 ATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGTCAGG 989205 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||||| ||| |||| | |||||| ||||||||||||||||| ||||| |||||| Sbjct 989206 TATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCG 989265 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAA-AACTAC 26066 || | || ||||||| || || | |||||||| || | ||| || |||| || | Sbjct 989266 AAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAAGCTC 989324 Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126 | || || ||||| |||||||| ||||||||||| | ||||||||| | || Sbjct 989325 CGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCA 989384 Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA--TGA-ATCTTGGATCCTGTCGATC 26183 ||||||| || || | || | || | ||||| ||| || | || | |||| Sbjct 989385 TTGGAACCAAGCCGCTCGACACACCAT---TGCTACCTGATATAAGCGCCCCATTTGATC 989441 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAA---ATAGCTGCACAAT 26240 |||| | | | |||||| || || ||||| | ||| ||| || |||| | Sbjct 989442 TAATGTTGGAAACATGAAGGCCAATACCACCTGAAGCTTTGGAAATCATGGCTG--TCTT 989499 Query 26241 CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAG 26300 || || ||| | |||||| || | ||| || || ||||||| | | |||||| | Sbjct 989500 GTG-AAGTGTCTTGAAAATACCATCTATAGAGTCCTCTATCATTCCCACAAGAAAACATG 989558 Query 26301 AAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAAT 26360 | || || | | | ||| |||| ||| ||||| ||||||| |||||| | ||| Sbjct 989559 ACGACAAGTACTGGTTCACTGTACCTGCATTGAATAAAGTCGGTGAGGCATGAATGAAAT 989618 Query 26361 A 26361 | Sbjct 989619 A 989619 Score = 84.2 bits (92), Expect = 1e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 25013 ATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACAT 25072 ||| |||| ||| || |||||||| | ||| ||| ||||| | ||| || || || Sbjct 988277 ATATATTCCCCACTTAATACTCTTCTCGTGTATACGTTAGAAGTCATTGGCTCGAACGAT 988336 Query 25073 TCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAA 25132 ||| | ||||| || ||||||||||| ||||| ||||||||| ||||| | ||||| Sbjct 988337 TCAGTGTTTCCCAATATTTGAGAAGTGGATGCCGTTGGCATTGGTGCTACCAGAAGCGAG 988396 Query 25133 TTTC 25136 |||| Sbjct 988397 TTTC 988400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039827300200