Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq4 217 2e-51
seq8 129 9e-25
seq6 114 2e-20
seq2 107 3e-18
>seq4
Length=1065440
Score = 217 bits (240), Expect = 2e-51
Identities = 554/834 (66%), Gaps = 24/834 (3%)
Strand=Plus/Plus
Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919
||| || | ||| || |||| | || ||||| ||||| ||||| || ||| || ||
Sbjct 810916 AGCCTTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGAT 810975
Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATT--AATTCG 17977
| ||| ||||||||||| ||||| || || |||| ||||| || ||
Sbjct 810976 GTTCTCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTT--CTTGTTCCCGAAAGCG 811033
Query 17978 TATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCT 18037
| || |||||| || || || || || || || ||||| ||| ||||||||
Sbjct 811034 ACCAGTAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCC 811093
Query 18038 AGTAGTCTGAAA--GGTAGAGCATCAAT-AATAAATTCTTTCTCTATCTCAACAGACTCT 18094
| || |||| ||||||||||| || || | ||||| || ||||| || | ||
Sbjct 811094 AATAAA--GAAACGGGTAGAGCATCGATGAAGTACCTCTTT-TCGATCTCGACGGCTTCA 811150
Query 18095 TTTATTATGTTT---ATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATAT 18151
| || || ||| || | || | |||| ||||| | | ||| | | |
Sbjct 811151 GTAATAATCTTTTCGATAATGGAAGGATCTGGC---TTATTCTTCAAATGAGCAAA---T 811204
Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211
| || ||| |||||||| || |||||||||||||||||| | || ||||||||| ||||
Sbjct 811205 AGTAGACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAAC 811264
Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271
|||| || ||||||| |||| | || || | ||| || || | || || || |||
Sbjct 811265 GTTAGACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAA 811324
Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTG 18331
||||| ||||| |||| | ||||| || | ||||| || || || | ||| | ||
Sbjct 811325 AAGAAAATACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTG 811384
Query 18332 CTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATA 18391
| | |||||| | |||||||| | | || || || | || ||
Sbjct 811385 TCCTGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATC 811444
Query 18392 GCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAA 18451
||||| || || ||| |||| || | ||| || |||||||| || ||||||| |||
Sbjct 811445 GCATTGAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAA 811504
Query 18452 TACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCG 18511
|| | || || || ||| ||||||| || || |||| ||| || || |||| ||
Sbjct 811505 TAGGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCT 811564
Query 18512 GGATATTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570
||| ||| | || || | |||| | || || ||||||||||| |||||||| ||||
Sbjct 811565 GGAATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGA 811623
Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATT 18627
| || || || ||||| ||| |||||| | |||| || || || | | ||
Sbjct 811624 GGCAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTT 811683
Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGA 18681
||||| |||| ||||| || || ||||||| ||||| | ||||| || ||
Sbjct 811684 ATTCCAATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGA 811737
>seq8
Length=676247
Score = 129 bits (142), Expect = 9e-25
Identities = 170/234 (73%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || ||||| || || |||||||| || ||||||||| |
Sbjct 116048 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 115989
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || ||| || ||||| || || || || || || ||
Sbjct 115988 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 115929
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 115928 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 115869
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || | || || || ||||||| ||||| ||||
Sbjct 115868 A--ACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGTG 115817
>seq6
Length=935435
Score = 114 bits (126), Expect = 2e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || || ||||| ||||| || || | || || || |||
Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || | || || |||||||||||||| || || || || |||
Sbjct 587118 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 587059
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| || |||||| |||||| |||| ||||| ||
Sbjct 587058 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586999
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040
|| || || | || | ||| |||| || |||||
Sbjct 586998 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATT 586961
Score = 109 bits (120), Expect = 8e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || || ||||| ||||| || || | || || || |||
Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || | || || |||||||||||||| || || || || |||
Sbjct 586206 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586147
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| || |||||| |||||| |||| ||||| ||
Sbjct 586146 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586087
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040
|| || || | || | ||| |||| || |||||
Sbjct 586086 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATT 586049
Score = 109 bits (120), Expect = 8e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || || ||||| ||||| || || | || || || |||
Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || | || || |||||||||||||| || || || || |||
Sbjct 586434 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586375
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| || |||||| |||||| |||| ||||| ||
Sbjct 586374 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586315
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040
|| || || | || | ||| |||| || |||||
Sbjct 586314 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATT 586277
Score = 109 bits (120), Expect = 8e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || || ||||| ||||| || || | || || || |||
Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || | || || |||||||||||||| || || || || |||
Sbjct 586662 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586603
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| || |||||| |||||| |||| ||||| ||
Sbjct 586602 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586543
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040
|| || || | || | ||| |||| || |||||
Sbjct 586542 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATT 586505
Score = 109 bits (120), Expect = 8e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || || ||||| ||||| || || | || || || |||
Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || | || || |||||||||||||| || || || || |||
Sbjct 586890 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586831
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| || |||||| |||||| |||| ||||| ||
Sbjct 586830 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586771
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040
|| || || | || | ||| |||| || |||||
Sbjct 586770 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATT 586733
Score = 107 bits (118), Expect = 3e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || || ||||| ||||| || || | || || || |||
Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || | || || |||||||||||||| || || || || |||
Sbjct 585750 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 585691
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| || |||||| |||||| |||| ||||| ||
Sbjct 585690 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 585631
Query 156003 AT 156004
||
Sbjct 585630 AT 585629
Score = 107 bits (118), Expect = 3e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || || ||||| ||||| || || | || || || |||
Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || | || || |||||||||||||| || || || || |||
Sbjct 585978 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 585919
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| || |||||| |||||| |||| ||||| ||
Sbjct 585918 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 585859
Query 156003 AT 156004
||
Sbjct 585858 AT 585857
>seq2
Length=1385486
Score = 107 bits (118), Expect = 3e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
|| || |||||||| || || || || || ||||| ||| |||||| | |||| ||
Sbjct 975620 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 975561
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || || || ||||| || ||||| || || || || |||||||||||||| | |
Sbjct 975560 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 975501
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGG 156015
|| |||||||| | ||||| |||||||| || || || | | ||||||| ||
Sbjct 975500 GCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACA--ACATCCAAAAGGAAT 975443
Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || || || || || ||||||| ||||| |||
Sbjct 975442 CCACTCTACACTTGGTTCTAAGATTGAGAGGTGGT 975408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871487689600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |