Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq6 154 3e-32 seq8 129 1e-24 seq2 129 1e-24 seq4 114 3e-20 >seq6 Length=935435 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | | || |||| ||| ||||||| || || ||| || ||||| Sbjct 586949 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 587008 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| |||| | |||| || | ||| ||||| || ||||| ||||| ||||| |||||| Sbjct 587009 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 587068 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || | || ||||| |||| ||| || || || Sbjct 587069 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 587128 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||||||||||||||| || || | ||| |||||||| Sbjct 587129 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | | || |||| ||| ||||||| || || ||| || ||||| Sbjct 586037 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 586096 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| |||| | |||| || | ||| ||||| || ||||| ||||| ||||| |||||| Sbjct 586097 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 586156 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || | || ||||| |||| ||| || || || Sbjct 586157 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 586216 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||||||||||||||| || || | || |||||||| Sbjct 586217 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | | || |||| ||| ||||||| || || ||| || ||||| Sbjct 586265 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 586324 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| |||| | |||| || | ||| ||||| || ||||| ||||| ||||| |||||| Sbjct 586325 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 586384 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || | || ||||| |||| ||| || || || Sbjct 586385 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 586444 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||||||||||||||| || || | || |||||||| Sbjct 586445 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | | || |||| ||| ||||||| || || ||| || ||||| Sbjct 586493 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 586552 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| |||| | |||| || | ||| ||||| || ||||| ||||| ||||| |||||| Sbjct 586553 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 586612 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || | || ||||| |||| ||| || || || Sbjct 586613 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 586672 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||||||||||||||| || || | || |||||||| Sbjct 586673 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | | || |||| ||| ||||||| || || ||| || ||||| Sbjct 586721 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 586780 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| |||| | |||| || | ||| ||||| || ||||| ||||| ||||| |||||| Sbjct 586781 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 586840 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || | || ||||| |||| ||| || || || Sbjct 586841 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 586900 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||||||||||||||| || || | || |||||||| Sbjct 586901 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | | || || | ||| ||||||| || || ||| || ||||| Sbjct 585809 ATACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 585868 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| |||| | |||| || | ||| ||||| || ||||| ||||| ||||| |||||| Sbjct 585869 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 585928 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || | || ||||| |||| ||| || || || Sbjct 585929 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 585988 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||||||||||||||| || || | || |||||||| Sbjct 585989 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Score = 143 bits (158), Expect = 5e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || || | ||| ||||||| || || ||| || ||||| |||| |||| | |||| Sbjct 585599 AAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCT 585658 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 || | ||| ||||| || ||||| ||||| ||||| |||||||| || |||||||||||| Sbjct 585659 TCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCT 585718 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || || || | || ||||| |||| ||| || || || || || || || |||||| Sbjct 585719 TGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTT 585778 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||||||| || || | || |||||||| Sbjct 585779 TTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 >seq8 Length=676247 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || ||||| | || || ||| || || ||||| Sbjct 115818 ACCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 115877 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 115878 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 115937 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || || ||||| || ||| || ||||| |||| || || ||||| || Sbjct 115938 GATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGAC 115997 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| | ||||| || ||||| || || || || | || || ||||| || Sbjct 115998 TTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048 >seq2 Length=1385486 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 192303 AATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATA 192362 ||| ||||||||||| | | || || || |||| ||| | || || ||| || || Sbjct 975402 AATGATACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTA 975461 Query 192363 ATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATC 192422 || || || |||| | || |||||||| |||||||||||||| ||||| ||||| || Sbjct 975462 GTCGGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTC 975521 Query 192423 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGA 192482 |||||| || ||||| || ||||| || || || ||||| |||| || || || Sbjct 975522 AGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGA 975581 Query 192483 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521 ||| ||||| | ||| ||||| |||||||| || || || Sbjct 975582 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 975620 >seq4 Length=1065440 Score = 114 bits (126), Expect = 3e-20 Identities = 391/612 (64%), Gaps = 9/612 (1%) Strand=Plus/Plus Query 49649 TAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAA 49708 || |||||| || || || ||||| || || ||| | || |||||||||||||| Sbjct 811039 TAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAA 811098 Query 49709 TTTAAATGGTAATGCATC-ATCAATAAATTCtttttctatttctacagcttgtttaatta 49767 || |||| ||||| || || | |||||| | || || || |||| |||| | Sbjct 811099 AGAAACGGGTAGAGCATCGATGAAGTACCTCTTTT-CGATCTCGACGGCTTCAGTAATAA 811157 Query 49768 tcataattatattattttttgataat--ttatatttaatatgattcgcatatattaaACA 49825 || | || || || ||| |||| || | |||| ||| ||| || ||| Sbjct 811158 TCTT--TTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGA---GCAAATAGTAGACA 811212 Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885 ||||||||| ||||||||||| || || || | || ||||| ||| ||| |||| || Sbjct 811213 TGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACC 811272 Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945 |||||||| ||| |||| || | ||| || || | ||||| || |||||||| || Sbjct 811273 TGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAAT 811332 Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATAT 50005 ||| || | || || || | | ||| || | || || ||| | || || Sbjct 811333 ACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAAT 811392 Query 50006 CCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 50065 ||| | |||||||| || || || | ||| || ||| || ||||| || || || || Sbjct 811393 CCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAA 811452 Query 50066 TAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125 ||| || |||| | ||||| | ||||| | || Sbjct 811453 TAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTC 811512 Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185 || || | |||||| ||||| || ||| || | | ||||||| | || Sbjct 811513 TGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTG 811572 Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245 ||||| | | ||| ||||||||||||||| ||| ||||||||||| || || || Sbjct 811573 CACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAA 811632 Query 50246 GAATGCTAAAAC 50257 ||| || || || Sbjct 811633 GAAGGCCAAGAC 811644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479293635600