Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq6 154 3e-32
seq2 138 2e-27
seq8 129 1e-24
seq4 123 5e-23
>seq6
Length=935435
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | || || |||| ||| ||||||| || || || || |||||
Sbjct 586037 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 586096
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | | || || | ||| ||||| || || || ||||| ||||||||||||
Sbjct 586097 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 586156
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| || || | || ||||| |||||||| || || ||
Sbjct 586157 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 586216
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||||||||||||||| || || | ||| ||||||||
Sbjct 586217 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | || || |||| ||| ||||||| || || || || |||||
Sbjct 586265 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 586324
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | | || || | ||| ||||| || || || ||||| ||||||||||||
Sbjct 586325 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 586384
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| || || | || ||||| |||||||| || || ||
Sbjct 586385 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 586444
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||||||||||||||| || || | ||| ||||||||
Sbjct 586445 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | || || |||| ||| ||||||| || || || || |||||
Sbjct 586493 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 586552
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | | || || | ||| ||||| || || || ||||| ||||||||||||
Sbjct 586553 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 586612
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| || || | || ||||| |||||||| || || ||
Sbjct 586613 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 586672
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||||||||||||||| || || | ||| ||||||||
Sbjct 586673 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | || || |||| ||| ||||||| || || || || |||||
Sbjct 586721 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 586780
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | | || || | ||| ||||| || || || ||||| ||||||||||||
Sbjct 586781 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 586840
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| || || | || ||||| |||||||| || || ||
Sbjct 586841 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 586900
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||||||||||||||| || || | ||| ||||||||
Sbjct 586901 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | || || || | ||| ||||||| || || || || |||||
Sbjct 585809 ATACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 585868
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | | || || | ||| ||||| || || || ||||| ||||||||||||
Sbjct 585869 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 585928
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| || || | || ||||| |||||||| || || ||
Sbjct 585929 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 585988
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||||||||||||||| || || | ||| ||||||||
Sbjct 585989 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | || || |||| ||| ||||||| || || || || |||||
Sbjct 586949 ATACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 587008
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | | || || | ||| ||||| || || || ||||| ||||||||||||
Sbjct 587009 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 587068
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| || || | || ||||| |||||||| || || ||
Sbjct 587069 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 587128
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||||||||||||||| || || | || ||||||||
Sbjct 587129 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | | || || || | ||| ||||||| || || || || ||||| ||
Sbjct 585583 ACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 585642
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|| || || | | || || | ||| ||||| || || || ||||| ||||||||||||||
Sbjct 585643 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 585702
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| |||||||||||||| || || | || ||||| |||||||| || || || ||
Sbjct 585703 AATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 585762
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || ||||||||||||||||| || || | ||| ||||||||
Sbjct 585763 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810
>seq2
Length=1385486
Score = 138 bits (152), Expect = 2e-27
Identities = 165/224 (74%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || || |||| ||| | || || || || ||
Sbjct 975403 ATGATACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAG 975462
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || |||| || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 975463 TCGGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 975522
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| ||||| || || |||
Sbjct 975523 GGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGAT 975582
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||| | ||| ||||| |||||||| || || || | |||
Sbjct 975583 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 975626
>seq8
Length=676247
Score = 129 bits (142), Expect = 1e-24
Identities = 172/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || ||||| | || || || ||
Sbjct 115810 TTCTTACCACCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTG 115869
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 115870 TAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 115929
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || || || || ||||| || ||| || ||||| ||||| || ||
Sbjct 115930 TCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAA 115989
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| | ||||| || ||||| || || || || | ||| || ||||| ||
Sbjct 115990 GATTCGACTTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048
>seq4
Length=1065440
Score = 123 bits (136), Expect = 5e-23
Identities = 358/543 (66%), Gaps = 11/543 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|| ||||| ||||| ||| | ||||||||||| || || || || | | || ||
Sbjct 810920 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 810979
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAA- 38950
| ||| ||||||||||| || | || || |||| | | | | | | | |
Sbjct 810980 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCT-TGTTCCCGAAAGCGACCAG 811038
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
|| |||||| || || || ||||| || || ||| | || ||||||||||||||
Sbjct 811039 TAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAA 811098
Query 39011 TTTAAATGGTAATGCATC-ATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| |||| ||||| || || | |||||| | || || || |||| |||| |
Sbjct 811099 AGAAACGGGTAGAGCATCGATGAAGTACCTCTTTT-CGATCTCGACGGCTTCAGTAATAA 811157
Query 39070 tcataattatattattttttgataat--ttatatttaatatgattcgcatataGTAAACA 39127
|| | || || || ||| |||| || | |||| ||| |||||| |||
Sbjct 811158 TCTT--TTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGA---GCAAATAGTAGACA 811212
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
||||||||| |||||||||||||| || || | || ||||| ||| ||| |||| ||
Sbjct 811213 TGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACC 811272
Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 39247
|||||||| ||| |||| || | ||| || || | ||||| || |||||||| ||
Sbjct 811273 TGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAAT 811332
Query 39248 ACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAAT 39307
||| || | || || || | | ||| || | || || ||| | || |||
Sbjct 811333 ACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAAT 811392
Query 39308 CCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 39367
||| | || ||||| || || || | ||| || ||| || ||||| || || || ||
Sbjct 811393 CCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAA 811452
Query 39368 TAA 39370
|||
Sbjct 811453 TAA 811455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135366404800
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