Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7 187 7e-42 seq1 122 3e-22 seq5 93.3 1e-13 seq4 87.8 5e-12 >seq7 Length=810710 Score = 187 bits (206), Expect = 7e-42 Identities = 363/532 (68%), Gaps = 7/532 (1%) Strand=Plus/Plus Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038 ||||| |||||||| | |||| ||| || || || | || ||| |||| ||| Sbjct 327616 CCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTAC 327675 Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095 | ||| ||| ||| ||| ||| ||||| ||||| ||||| |||||||| || ||| Sbjct 327676 AAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTG 327735 Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155 ||||||| || ||| || || | || || ||||| || || || || ||||| ||| Sbjct 327736 AAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAA 327795 Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215 || | || |||| || || || || | ||||||||||| | |||||||| | Sbjct 327796 CCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATA 327855 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || |||||||| | ||||| | ||||||| || || || ||||| | ||| | | ||| Sbjct 327856 GCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGG 327915 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335 | || ||| | ||||| ||||| || ||||| ||||| || || || | |||||| Sbjct 327916 AAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGA 327975 Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGAT-TAGAC-C 156393 || || || | ||||| || || ||||| || ||| ||| | | | | Sbjct 327976 ATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTC--GATGTCGTCAC 328033 Query 156394 CGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCAT 156453 | ||||||| | || || ||||| |||||| |||||||| || | | | |||| Sbjct 328034 CATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCAT 328093 Query 156454 CAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505 || | ||| || || | || ||||||||||| ||||| ||||| | ||| Sbjct 328094 TTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAA 328145 Score = 87.8 bits (96), Expect = 5e-12 Identities = 254/390 (65%), Gaps = 6/390 (2%) Strand=Plus/Minus Query 288957 TAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGA 289013 ||| | |||||| | || |||||||||||| || ||||| | | | | |||| Sbjct 461703 TAACAATTGATTCAAAGTGGCTTCCCTTTCATCGTTAGAACCACCCATGGCACCACCTTT 461644 Query 289014 ATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATT 289073 | | || || ||||| | ||||| ||||| |||| ||| || | |||| | | Sbjct 461643 ACCTCT---TTCCTTACCGATGGCATCGATTTCATCAACGAAGATGATTGACGGTGCCAT 461587 Query 289074 TTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTC 289133 || ||| | | | || | || | || | || || || | ||| ||| ||||||| Sbjct 461586 TTTTCTACCTTGTTCGAAAAGATCACGAACTCTAGAAGCACCCACACCGACAAACATTTC 461527 Query 289134 TACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCT 289193 ||| ||||||||| | || || | |||| |||| |||||| ||||| |||| | Sbjct 461526 TACGAATTCAGAACCAGAGACAGACAAAAATGGTACACCTGCTTCACCTGCGGTTGCCTT 461467 Query 289194 CGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTT 289253 |||| | ||||||||||| |||||||| || ||| | | || || | || Sbjct 461466 TGCCAACAAAGTCTTACCTGTACCAGGTGGACCTGATAAGATGGCACCACGAGGAATCTT 461407 Query 289254 TGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTC 289313 ||||| | | ||||| |||||| |||| || || | |||| |||| || || Sbjct 461406 GGCCCCGAGTGCTGTGTATTTGTCAGGGTTCTTCAAGAAATGAACAAATTCCATAATCTC 461347 Query 289314 ATATTTTGCCTCATCACATCCTGCTACATC 289343 | || || || | ||| ||||| || || Sbjct 461346 CTGCTTGGCTTCGTTACAACCTGCAACGTC 461317 >seq1 Length=1424806 Score = 122 bits (134), Expect = 3e-22 Identities = 339/510 (66%), Gaps = 14/510 (3%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||| |||| |||||||||||||| |||||||||||||| | ||||||||||| | | Sbjct 642746 GCACCATGTGCGATCATACAATCACGTTCCATTTCACCGAATCTGAGACCACCATCTCTA 642805 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | |||||||| | ||||| | || | | ||||||||| | | ||| Sbjct 642806 GATCTACCCTCAACTGGCTGTCTTGTCAAAACTTGCATAGGACCACGTGCTCTCGCATGA 642865 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664 ||| |||| ||||| || | ||||| |||||| | | ||||||| |||||| | Sbjct 642866 ATCTTGTCATCCACCATGTGTCTTAGACGTTGGTAGTACGTAGGACCGAAGAAGAT--TT 642923 Query 251665 GAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCA 251721 || | ||| || | ||||| | | || ||||| |||||| ||| ||||| | Sbjct 642924 GA-GCCATCAACTTTTTACCAGTATGTCCATTGTACATGACTTCGAAACCACGAGATTGA 642982 Query 251722 TAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGTG 251781 |||||| | | |||| || |||| | | | | | | | | || ||| | Sbjct 642983 TAACCATGCTCACGTAGAAGCTTAGAAATACCTTCCACAGTAATGTCGGTGAA--TGGAG 643040 Query 251782 C--CGTCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTCAGT 251838 |||| || | ||| | | | | | ||||| | | || || | | Sbjct 643041 ATGCGTCACCTTCGTTACC-AGATAATGCTGCCACTTTACTAAGTAGACATTCGATTAAA 643099 Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || |||| ||||||||| ||||| || |||||||||||||| | || ||| | Sbjct 643100 TGCGCGACCGTCATACGAGATGGAATGGCGTGGGGATTGATGATTAGATCTGGTACAATA 643159 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || ||||||||||| ||||||||| | || | ||| || | |||||||| || ||||| Sbjct 643160 CCTTCAGCAGTGAATGGCATATCC-TCTCTACCGTAAGTGATACCAATAGTACCTTTTTG 643218 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||| ||| || |||||||| Sbjct 643219 ACCGTGACGAGAGGCGAATTTGTCACCAAT 643248 Score = 102 bits (112), Expect = 2e-16 Identities = 443/690 (64%), Gaps = 17/690 (2%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||| ||| || || ||||| || || || || | | ||||| || | |||||||| Sbjct 988860 CAACAGAAGCAAGGTTACAGACAGCTGTTTCGTCCTTAGAACTGTACTCAATAATCTCAC 988919 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | || ||||| || ||||||| || |||||||||||||| ||||| || |||| Sbjct 988920 AACAAAGGTTTGACGATCTGATGGTCCCCAAATTCTTCTGGTTTGATTTCTCATTGCAAG 988979 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 || ||||| | ||| | || ||||||||| || || | | ||||| || Sbjct 988980 AGTCTTTGTACAACATGAAAGGACCTCCTGTCTCAATTTGACTTTGTAAAATCTCAGACC 989039 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATT--TCATATA 155824 | || | | || || || |||| | | || | || ||||| | ||||||| Sbjct 989040 ATAGTTTTTGAGCCTTGATCCGCTTCATTGGTAAACCATTCGTTTCATAATGCTCATATA 989099 Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAA 155884 || || | || | ||||| ||| | ||||||||| || ||| || | ||| Sbjct 989100 -AGTCATCAA-ATTCTTTGCCGTACACATCGCATAGTCCAGGGGCCTCATCTGGACTAAA 989157 Query 155885 CAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCCCAAATA 155942 || ||||| ||| || | || ||| ||| || | ||| ||| | Sbjct 989158 CAAACACCAATCGCCATTG--GACTCGACCCGCCTCATGAACAGGTCAGGTATCCACAGC 989215 Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002 ||| | || || || || || | || || | ||||| ||||| || |||| || Sbjct 989216 GCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAGA 989275 Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA-AACTACCATTCCTCTT 156061 || || || || | ||| |||||| ||||| || |||| || || |||||| Sbjct 989276 AAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAAGCTCCGGGCCTCTT 989334 Query 156062 G---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118 | ||||||||||||||||| | ||||| |||||||| || | ||||| |||| | Sbjct 989335 GTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCAA 989394 Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178 || | || |||||| | || ||| ||| ||| ||| | || || || Sbjct 989395 GCCGCTCGACACACCATTGCTACCTGATATAAGCGCCCCATTTGATCTAATGTTGGAAAC 989454 Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT--ACAGTATTG 156236 ||| || |||||||||||||| ||| |||| | | || || | | | || ||| Sbjct 989455 ATGAAGGCCAATACCACCTGAAGCTTTGGAAA--TCATGGCTGTCTTGTGAAGTGTCTTG 989512 Query 156237 AAAATACCTTCAATAGAATCATCTTCCATT 156266 |||||||| || ||||| || ||| |||| Sbjct 989513 AAAATACCATCTATAGAGTCCTCTATCATT 989542 >seq5 Length=957853 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 302552 TATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611 |||| ||| || ||| || ||||||| | ||| | | |||||||||||||||||||| Sbjct 531527 TATCGTAATGAACCATGATATCTTCCAGAGCCTTAACAAGACGACGCTGAATATAACCAG 531468 Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671 | | ||| || ||||| ||||| || | ||| ||||||||||||| || ||||||| Sbjct 531467 TCTCGGCTGTCTTGACAGCGGTATCGATCAAACCTTCACGACCACCCATTGCGTGGAAGA 531408 Query 302672 ATAGCTCTT 302680 | | |||| Sbjct 531407 AGAATTCTT 531399 >seq4 Length=1065440 Score = 87.8 bits (96), Expect = 5e-12 Identities = 90/117 (77%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | ||||| |||||||| | || ||||| | | || |||||||||||||| Sbjct 348981 AATTTCCTTGATACGAGGAACACCCAGTGTAACGTT---CATCGAAGCAACACCAGCAAA 348925 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||| ||||| |||| ||| | ||||||| |||||||||||| ||| || |||| Sbjct 348924 GTGAAAAGTTTTCAAAGTCATTTGAGTACCAGGCTCACCAATAGATTGAGCACCAAT 348868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816543970872