Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq7 187 7e-42
seq1 122 3e-22
seq5 93.3 1e-13
seq4 87.8 5e-12
>seq7
Length=810710
Score = 187 bits (206), Expect = 7e-42
Identities = 363/532 (68%), Gaps = 7/532 (1%)
Strand=Plus/Plus
Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038
||||| |||||||| | |||| ||| || || || | || ||| |||| |||
Sbjct 327616 CCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTAC 327675
Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095
| ||| ||| ||| ||| ||| ||||| ||||| ||||| |||||||| || |||
Sbjct 327676 AAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTG 327735
Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155
||||||| || ||| || || | || || ||||| || || || || ||||| |||
Sbjct 327736 AAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAA 327795
Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215
|| | || |||| || || || || | ||||||||||| | |||||||| |
Sbjct 327796 CCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATA 327855
Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275
|| |||||||| | ||||| | ||||||| || || || ||||| | ||| | | |||
Sbjct 327856 GCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGG 327915
Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335
| || ||| | ||||| ||||| || ||||| ||||| || || || | ||||||
Sbjct 327916 AAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGA 327975
Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGAT-TAGAC-C 156393
|| || || | ||||| || || ||||| || ||| ||| | | | |
Sbjct 327976 ATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTC--GATGTCGTCAC 328033
Query 156394 CGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCAT 156453
| ||||||| | || || ||||| |||||| |||||||| || | | | ||||
Sbjct 328034 CATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCAT 328093
Query 156454 CAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505
|| | ||| || || | || ||||||||||| ||||| ||||| | |||
Sbjct 328094 TTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAA 328145
Score = 87.8 bits (96), Expect = 5e-12
Identities = 254/390 (65%), Gaps = 6/390 (2%)
Strand=Plus/Minus
Query 288957 TAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGA 289013
||| | |||||| | || |||||||||||| || ||||| | | | | ||||
Sbjct 461703 TAACAATTGATTCAAAGTGGCTTCCCTTTCATCGTTAGAACCACCCATGGCACCACCTTT 461644
Query 289014 ATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATT 289073
| | || || ||||| | ||||| ||||| |||| ||| || | |||| | |
Sbjct 461643 ACCTCT---TTCCTTACCGATGGCATCGATTTCATCAACGAAGATGATTGACGGTGCCAT 461587
Query 289074 TTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTC 289133
|| ||| | | | || | || | || | || || || | ||| ||| |||||||
Sbjct 461586 TTTTCTACCTTGTTCGAAAAGATCACGAACTCTAGAAGCACCCACACCGACAAACATTTC 461527
Query 289134 TACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCT 289193
||| ||||||||| | || || | |||| |||| |||||| ||||| |||| |
Sbjct 461526 TACGAATTCAGAACCAGAGACAGACAAAAATGGTACACCTGCTTCACCTGCGGTTGCCTT 461467
Query 289194 CGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTT 289253
|||| | ||||||||||| |||||||| || ||| | | || || | ||
Sbjct 461466 TGCCAACAAAGTCTTACCTGTACCAGGTGGACCTGATAAGATGGCACCACGAGGAATCTT 461407
Query 289254 TGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTC 289313
||||| | | ||||| |||||| |||| || || | |||| |||| || ||
Sbjct 461406 GGCCCCGAGTGCTGTGTATTTGTCAGGGTTCTTCAAGAAATGAACAAATTCCATAATCTC 461347
Query 289314 ATATTTTGCCTCATCACATCCTGCTACATC 289343
| || || || | ||| ||||| || ||
Sbjct 461346 CTGCTTGGCTTCGTTACAACCTGCAACGTC 461317
>seq1
Length=1424806
Score = 122 bits (134), Expect = 3e-22
Identities = 339/510 (66%), Gaps = 14/510 (3%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| |||| |||||||||||||| |||||||||||||| | ||||||||||| | |
Sbjct 642746 GCACCATGTGCGATCATACAATCACGTTCCATTTCACCGAATCTGAGACCACCATCTCTA 642805
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
| |||||||| | ||||| | || | | ||||||||| | | |||
Sbjct 642806 GATCTACCCTCAACTGGCTGTCTTGTCAAAACTTGCATAGGACCACGTGCTCTCGCATGA 642865
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664
||| |||| ||||| || | ||||| |||||| | | ||||||| |||||| |
Sbjct 642866 ATCTTGTCATCCACCATGTGTCTTAGACGTTGGTAGTACGTAGGACCGAAGAAGAT--TT 642923
Query 251665 GAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCA 251721
|| | ||| || | ||||| | | || ||||| |||||| ||| ||||| |
Sbjct 642924 GA-GCCATCAACTTTTTACCAGTATGTCCATTGTACATGACTTCGAAACCACGAGATTGA 642982
Query 251722 TAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGTG 251781
|||||| | | |||| || |||| | | | | | | | | || ||| |
Sbjct 642983 TAACCATGCTCACGTAGAAGCTTAGAAATACCTTCCACAGTAATGTCGGTGAA--TGGAG 643040
Query 251782 C--CGTCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTCAGT 251838
|||| || | ||| | | | | | ||||| | | || || | |
Sbjct 643041 ATGCGTCACCTTCGTTACC-AGATAATGCTGCCACTTTACTAAGTAGACATTCGATTAAA 643099
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| |||| ||||||||| ||||| || |||||||||||||| | || ||| |
Sbjct 643100 TGCGCGACCGTCATACGAGATGGAATGGCGTGGGGATTGATGATTAGATCTGGTACAATA 643159
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| ||||||||||| ||||||||| | || | ||| || | |||||||| || |||||
Sbjct 643160 CCTTCAGCAGTGAATGGCATATCC-TCTCTACCGTAAGTGATACCAATAGTACCTTTTTG 643218
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||| ||| || ||||||||
Sbjct 643219 ACCGTGACGAGAGGCGAATTTGTCACCAAT 643248
Score = 102 bits (112), Expect = 2e-16
Identities = 443/690 (64%), Gaps = 17/690 (2%)
Strand=Plus/Plus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646
||| ||| || || ||||| || || || || | | ||||| || | ||||||||
Sbjct 988860 CAACAGAAGCAAGGTTACAGACAGCTGTTTCGTCCTTAGAACTGTACTCAATAATCTCAC 988919
Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706
| || ||||| || ||||||| || |||||||||||||| ||||| || ||||
Sbjct 988920 AACAAAGGTTTGACGATCTGATGGTCCCCAAATTCTTCTGGTTTGATTTCTCATTGCAAG 988979
Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766
|| ||||| | ||| | || ||||||||| || || | | ||||| ||
Sbjct 988980 AGTCTTTGTACAACATGAAAGGACCTCCTGTCTCAATTTGACTTTGTAAAATCTCAGACC 989039
Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATT--TCATATA 155824
| || | | || || || |||| | | || | || ||||| | |||||||
Sbjct 989040 ATAGTTTTTGAGCCTTGATCCGCTTCATTGGTAAACCATTCGTTTCATAATGCTCATATA 989099
Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAA 155884
|| || | || | ||||| ||| | ||||||||| || ||| || | |||
Sbjct 989100 -AGTCATCAA-ATTCTTTGCCGTACACATCGCATAGTCCAGGGGCCTCATCTGGACTAAA 989157
Query 155885 CAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCCCAAATA 155942
|| ||||| ||| || | || ||| ||| || | ||| ||| |
Sbjct 989158 CAAACACCAATCGCCATTG--GACTCGACCCGCCTCATGAACAGGTCAGGTATCCACAGC 989215
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
||| | || || || || || | || || | ||||| ||||| || |||| ||
Sbjct 989216 GCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAGA 989275
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA-AACTACCATTCCTCTT 156061
|| || || || | ||| |||||| ||||| || |||| || || ||||||
Sbjct 989276 AAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAAGCTCCGGGCCTCTT 989334
Query 156062 G---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118
| ||||||||||||||||| | ||||| |||||||| || | ||||| |||| |
Sbjct 989335 GTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCAA 989394
Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178
|| | || |||||| | || ||| ||| ||| ||| | || || ||
Sbjct 989395 GCCGCTCGACACACCATTGCTACCTGATATAAGCGCCCCATTTGATCTAATGTTGGAAAC 989454
Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT--ACAGTATTG 156236
||| || |||||||||||||| ||| |||| | | || || | | | || |||
Sbjct 989455 ATGAAGGCCAATACCACCTGAAGCTTTGGAAA--TCATGGCTGTCTTGTGAAGTGTCTTG 989512
Query 156237 AAAATACCTTCAATAGAATCATCTTCCATT 156266
|||||||| || ||||| || ||| ||||
Sbjct 989513 AAAATACCATCTATAGAGTCCTCTATCATT 989542
>seq5
Length=957853
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 302552 TATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611
|||| ||| || ||| || ||||||| | ||| | | ||||||||||||||||||||
Sbjct 531527 TATCGTAATGAACCATGATATCTTCCAGAGCCTTAACAAGACGACGCTGAATATAACCAG 531468
Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671
| | ||| || ||||| ||||| || | ||| ||||||||||||| || |||||||
Sbjct 531467 TCTCGGCTGTCTTGACAGCGGTATCGATCAAACCTTCACGACCACCCATTGCGTGGAAGA 531408
Query 302672 ATAGCTCTT 302680
| | ||||
Sbjct 531407 AGAATTCTT 531399
>seq4
Length=1065440
Score = 87.8 bits (96), Expect = 5e-12
Identities = 90/117 (77%), Gaps = 3/117 (3%)
Strand=Plus/Minus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | ||||| |||||||| | || ||||| | | || ||||||||||||||
Sbjct 348981 AATTTCCTTGATACGAGGAACACCCAGTGTAACGTT---CATCGAAGCAACACCAGCAAA 348925
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
||| ||||| |||| ||| | ||||||| |||||||||||| ||| || ||||
Sbjct 348924 GTGAAAAGTTTTCAAAGTCATTTGAGTACCAGGCTCACCAATAGATTGAGCACCAAT 348868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816543970872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |