Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq8 122 7e-23
seq2 122 7e-23
seq6 107 1e-18
>seq8
Length=676247
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||| ||||| || || |
Sbjct 115819 CCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 115878
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 115879 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 115938
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|||||||| |||||||| | || |||||| | || | |||||||||| ||| |||
Sbjct 115939 ATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 115998
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| | || ||||| || || || || || || || || || ||||| ||
Sbjct 115999 TCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048
>seq2
Length=1385486
Score = 122 bits (134), Expect = 7e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || || |||||||| ||||| ||||| || || |
Sbjct 975409 CCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 975468
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 975469 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 975528
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| |||| |||||| | || | |||||||||| ||| ||
Sbjct 975529 ATACCTTCCTTGTCTTG-AATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 975587
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| || || || || ||
Sbjct 975588 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 975626
>seq6
Length=935435
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | ||| | || |||| ||| | || ||||| || || ||||| ||||| |
Sbjct 585584 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585643
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || ||||| || || || | ||||||||||| || || || |||
Sbjct 585644 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585703
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| ||||| ||||| ||| || | |||||| | || | ||| ||||| || ||
Sbjct 585704 ATACCTTCTTTATCTTG-AATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 585762
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || ||||| |||||||| || || || || ||||||||
Sbjct 585763 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | ||| | || |||| ||| | || ||||| || || ||||| ||||| |
Sbjct 585812 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585871
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || ||||| || || || | ||||||||||| || || || |||
Sbjct 585872 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585931
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| ||||| ||||| ||| || | |||||| | || | ||| ||||| || ||
Sbjct 585932 ATACCTTCTTTATCTTG-AATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 585990
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || ||||| |||||||| || || || || ||||||||
Sbjct 585991 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||| || || ||||| ||||| | | || | ||| || ||||| || ||
Sbjct 586982 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 587041
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708
|| | ||||||||||| || || || |||||||| ||||| ||||| ||| || | ||
Sbjct 587042 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 587100
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|||| | || | ||| ||||| || || || || || || ||||| |||||||| ||
Sbjct 587101 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 587160
Query 29769 TTTAACAAATATCTGCAT 29786
|| ||||| ||||||||
Sbjct 587161 CTTGACAAAAATCTGCAT 587178
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||| || || ||||| ||||| | | || | ||| || ||||| || ||
Sbjct 586070 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586129
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708
|| | ||||||||||| || || || |||||||| ||||| ||||| ||| || | ||
Sbjct 586130 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 586188
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|||| | || | ||| ||||| || || || || || || ||||| |||||||| ||
Sbjct 586189 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 586248
Query 29769 TTTAACAAATATCTGCAT 29786
|| || || ||||||||
Sbjct 586249 CTTGACGAAGATCTGCAT 586266
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||| || || ||||| ||||| | | || | ||| || ||||| || ||
Sbjct 586298 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586357
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708
|| | ||||||||||| || || || |||||||| ||||| ||||| ||| || | ||
Sbjct 586358 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 586416
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|||| | || | ||| ||||| || || || || || || ||||| |||||||| ||
Sbjct 586417 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 586476
Query 29769 TTTAACAAATATCTGCAT 29786
|| || || ||||||||
Sbjct 586477 CTTGACGAAGATCTGCAT 586494
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||| || || ||||| ||||| | | || | ||| || ||||| || ||
Sbjct 586526 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586585
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708
|| | ||||||||||| || || || |||||||| ||||| ||||| ||| || | ||
Sbjct 586586 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 586644
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|||| | || | ||| ||||| || || || || || || ||||| |||||||| ||
Sbjct 586645 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 586704
Query 29769 TTTAACAAATATCTGCAT 29786
|| || || ||||||||
Sbjct 586705 CTTGACGAAGATCTGCAT 586722
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||| || || ||||| ||||| | | || | ||| || ||||| || ||
Sbjct 586754 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586813
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708
|| | ||||||||||| || || || |||||||| ||||| ||||| ||| || | ||
Sbjct 586814 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 586872
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|||| | || | ||| ||||| || || || || || || ||||| |||||||| ||
Sbjct 586873 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 586932
Query 29769 TTTAACAAATATCTGCAT 29786
|| || || ||||||||
Sbjct 586933 CTTGACGAAGATCTGCAT 586950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218937087896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |