Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq8 122 7e-23 seq2 122 7e-23 seq6 107 1e-18 >seq8 Length=676247 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| ||||| ||||| || || | Sbjct 115819 CCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 115878 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 115879 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 115938 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| |||||||| | || |||||| | || | |||||||||| ||| ||| Sbjct 115939 ATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 115998 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | || ||||| || || || || || || || || || ||||| || Sbjct 115999 TCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048 >seq2 Length=1385486 Score = 122 bits (134), Expect = 7e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || || |||||||| ||||| ||||| || || | Sbjct 975409 CCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 975468 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || | ||| || |||||| | ||||||||||| || || || || Sbjct 975469 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 975528 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| ||| |||| |||||| | || | |||||||||| ||| || Sbjct 975529 ATACCTTCCTTGTCTTG-AATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 975587 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 ||| | ||| || || || ||||| || || || || || Sbjct 975588 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 975626 >seq6 Length=935435 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| | || |||| ||| | || ||||| || || ||||| ||||| | Sbjct 585584 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585643 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || ||||| || || || | ||||||||||| || || || ||| Sbjct 585644 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585703 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||| ||||| ||| || | |||||| | || | ||| ||||| || || Sbjct 585704 ATACCTTCTTTATCTTG-AATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 585762 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| |||||||| || || || || |||||||| Sbjct 585763 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| | || |||| ||| | || ||||| || || ||||| ||||| | Sbjct 585812 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585871 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || ||||| || || || | ||||||||||| || || || ||| Sbjct 585872 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585931 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||| ||||| ||| || | |||||| | || | ||| ||||| || || Sbjct 585932 ATACCTTCTTTATCTTG-AATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 585990 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| |||||||| || || || || |||||||| Sbjct 585991 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||| || || ||||| ||||| | | || | ||| || ||||| || || Sbjct 586982 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 587041 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708 || | ||||||||||| || || || |||||||| ||||| ||||| ||| || | || Sbjct 587042 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 587100 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 |||| | || | ||| ||||| || || || || || || ||||| |||||||| || Sbjct 587101 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 587160 Query 29769 TTTAACAAATATCTGCAT 29786 || ||||| |||||||| Sbjct 587161 CTTGACAAAAATCTGCAT 587178 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||| || || ||||| ||||| | | || | ||| || ||||| || || Sbjct 586070 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586129 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708 || | ||||||||||| || || || |||||||| ||||| ||||| ||| || | || Sbjct 586130 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 586188 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 |||| | || | ||| ||||| || || || || || || ||||| |||||||| || Sbjct 586189 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 586248 Query 29769 TTTAACAAATATCTGCAT 29786 || || || |||||||| Sbjct 586249 CTTGACGAAGATCTGCAT 586266 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||| || || ||||| ||||| | | || | ||| || ||||| || || Sbjct 586298 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586357 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708 || | ||||||||||| || || || |||||||| ||||| ||||| ||| || | || Sbjct 586358 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 586416 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 |||| | || | ||| ||||| || || || || || || ||||| |||||||| || Sbjct 586417 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 586476 Query 29769 TTTAACAAATATCTGCAT 29786 || || || |||||||| Sbjct 586477 CTTGACGAAGATCTGCAT 586494 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||| || || ||||| ||||| | | || | ||| || ||||| || || Sbjct 586526 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586585 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708 || | ||||||||||| || || || |||||||| ||||| ||||| ||| || | || Sbjct 586586 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 586644 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 |||| | || | ||| ||||| || || || || || || ||||| |||||||| || Sbjct 586645 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 586704 Query 29769 TTTAACAAATATCTGCAT 29786 || || || |||||||| Sbjct 586705 CTTGACGAAGATCTGCAT 586722 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||| || || ||||| ||||| | | || | ||| || ||||| || || Sbjct 586754 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586813 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708 || | ||||||||||| || || || |||||||| ||||| ||||| ||| || | || Sbjct 586814 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTG-AATCTTGCTCTT 586872 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 |||| | || | ||| ||||| || || || || || || ||||| |||||||| || Sbjct 586873 GACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGT 586932 Query 29769 TTTAACAAATATCTGCAT 29786 || || || |||||||| Sbjct 586933 CTTGACGAAGATCTGCAT 586950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218937087896