Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq7 246 7e-60
seq4 145 2e-29
>seq7
Length=810710
Score = 246 bits (272), Expect = 7e-60
Identities = 579/867 (67%), Gaps = 9/867 (1%)
Strand=Plus/Minus
Query 110299 TTGACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGA 110358
|| |||||||||| ||||||||||| || ||| ||||| | || | | ||||| ||
Sbjct 328144 TTAACTATTTTGGGTTCAAAACTCTGGAGCGTTCTTATCTGCTGAGGATAAATGGTGAAG 328085
Query 110359 TCATTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATA 110418
|| ||||||||||||||| ||| || | | ||||| ||||||||||||| | || |
Sbjct 328084 TCGCTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATTCATGGTGACGACA 328025
Query 110419 TTAAAGCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACT 110477
| | ||| |||||| |||| || | || | | | | | ||||||||| ||
Sbjct 328024 TCGAGTCTGCTATTGAGACTTATAATCTGATGTCCTTGAGATACTTC-ATTCATGCTTCT 327966
Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537
|| || || || || || || ||| | || || |||| || || || | |
Sbjct 327965 CCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCC 327906
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597
|| || ||||| || || || |||||||| ||| || | || ||| |||| | ||||||
Sbjct 327905 ATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAATGTGCTATGATTTCT 327846
Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
|| | | |||| || |||||| | ||| | || | ||||| || | || || ||||
Sbjct 327845 AAGACCGCTGGTGGTATTGGTTTGCACATACACAACATTCGTTCTACGGGTTCATATATT 327786
Query 110658 GCAACAGCGAAGGGTGCTTC-AACTGGACTTGTTCCA-ATGTTAAGAGTCTTCAACGACA 110715
||| | || ||| |||| ||| || ||| ||| ||| || | ||||||||| |||
Sbjct 327785 GCAGGTACTAACGGTACTTCGAACGGG--TTGATCCCCATGGTACGTGTCTTCAACAACA 327728
Query 110716 CTGCAAAATATGTGAATCAAGGTGGTAAGAGAA---ATGGCTCATTTGCTATCTATCTCG 110772
|||| |||||| ||||||||||||| | || || | || ||| | || | |
Sbjct 327727 CTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGCCAGGTGCTTTCGCTTTGTACTTGG 327668
Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832
|||| ||||| |||| || ||||| ||| |||| | || || || || || ||||
Sbjct 327667 AACCATGGCACGCAGACATCTTTGATTTCATAGATATCCGGAAGAACCACGGTAAGGAAG 327608
Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892
| | ||| | ||||| || || | |||||| ||||||| |||||||||||||
Sbjct 327607 AGATTCGTGCAAGAGATTTGTTCCCAGCCCTCTGGATTCCAGATTTGTTCATGAAACGTG 327548
Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952
||||||| ||||| ||| || | | | ||| | |||| ||| | |||||||
Sbjct 327547 TTCAAGAGAATGGTGAATGGACTTTGTTCTCTCCAAGTGAAGCTCCAGGTTTGTCTGATG 327488
Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCA 111012
| ||||| | || ||||||| | | || ||| || | ||||| | | |
Sbjct 327487 TTTATGGTGATGAATTTGAAGCCTTGTATGAACGTTACGTCGCTGAAGGTCGTGGTAGAA 327428
Query 111013 AACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAA 111072
| || ||||||| |||| |||| | ||| | ||||| ||| || ||||| |
Sbjct 327427 AGACTATCAAAGCTCAAAAACTGTGGTACGCTATCTTGGAATCTCAAACAGAGACTGGTA 327368
Query 111073 CTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAA 111132
|||| | || | || |||||| |||| || || |||| ||| || || |
Sbjct 327367 CTCCATTCATGCTTTACAAAGATGCCTGTAATATAAAGAGCAACCAAAAGAACTTGGGTA 327308
Query 111133 CAATTAAGTCTAGTAATTTGTGCTGTG 111159
| ||||| || ||| ||||| ||||
Sbjct 327307 CCATTAAATCCTCTAACTTGTGTTGTG 327281
>seq4
Length=1065440
Score = 145 bits (160), Expect = 2e-29
Identities = 496/759 (65%), Gaps = 27/759 (4%)
Strand=Plus/Minus
Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491
||||| ||||| ||| | || || ||| | |||||||| | | | || | |||
Sbjct 811791 CTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAGAGGCTTCGTTC 811732
Query 131492 TGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCT-T 131550
||||| | |||||||| ||| || | || |||||| |||||||| ||| | | | |
Sbjct 811731 TGGACGGCCGAAGAGATTGATCTGTCGAAGGATATTCATGATTGG----AATAACCGTAT 811676
Query 131551 GAATGAAAA----AGATTTTGTTTCCAAAGT-TCTTG-CATTCTTCGCCGGAAGTGATGG 131604
|||||| || ||||||| || || ||||| | ||||| || | ||||||
Sbjct 811675 GAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCTCTGATGG 811616
Query 131605 CATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAAC 131664
|| || | ||| ||| | ||| ||||||| | |||| | | ||||| |||| |
Sbjct 811615 TATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCAGAAGTGCAAATTCCAGAAGCTAA 811556
Query 131665 ATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATT 131724
|| ||||| || ||| | | ||| ||||| |||| ||||| | ||
Sbjct 811555 ATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATTCCCTGTT 811496
Query 131725 GATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAA 131784
||||| | | | | || || | | || | || ||||| |||| | | ||
Sbjct 811495 AATTGATACTTATATCAAGGATCCAAAGGAAAGCGATTTCTTATTCAATGCGATTGAAAA 811436
Query 131785 ATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGA---TGATTC 131841
||||| |||||| |||| || ||||||||||| | ||||||||| || ||| ||
Sbjct 811435 CATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCAGGACAGTGAATC 811376
Query 131842 CGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG 131901
|| || | ||| | || ||||| ||| |||||||||| |||||||||||
Sbjct 811375 ---TATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGTATTTTCTTTTCAGG 811319
Query 131902 TGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTC 131961
| | || ||||||||| ||| | |||||| || | ||||| || || | || ||
Sbjct 811318 TTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACGTTTTC 811259
Query 131962 CAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATAT-TAATCTATA 132020
|| |||| |||| |||||||||| || ||||| || ||||| || | || | | |
Sbjct 811258 TAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGC-ATGTCTACTAT-TT 811201
Query 132021 GAAAATTTGCTG-ATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTT 132079
| ||||| | |||| | ||| | ||| || | |||| | ||||| ||
Sbjct 811200 GCTCATTTGAAGAATAAGCCAGATCCTTCCATTATCGAAAAGATTATTACTGAAGCCGTC 811141
Query 132080 GATATCGAGAAGGAGTTTATTACAGAAGCTTTGCC--TTGCAATTTGATTGGG-ATGAAT 132136
|| ||||| ||| || | | || ||| | || || | || |||||| |||||
Sbjct 811140 GAGATCGAAAAGAGGTACTTCATCGATGCTCTACCCGTTTC---TTTATTGGGTATGAAC 811084
Query 132137 GCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGAT 132175
|| ||| ||||| ||||| |||| ||||| ||||||
Sbjct 811083 GCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCTGAT 811045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186811948461816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |