Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2 102 5e-17 seq6 87.8 1e-12 >seq2 Length=1385486 Score = 102 bits (112), Expect = 5e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| ||||||||| || ||||| |||||||| ||||| Sbjct 975408 ACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGA 975467 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| |||||||| || || ||||| ||||| | || || || | || Sbjct 975468 CAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 975527 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || | |||| ||| | ||||| ||||| | Sbjct 975528 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 975586 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | || | ||||| || ||||| || || || || || || Sbjct 975587 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 975626 >seq6 Length=935435 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | || |||| ||| | ||| || || || |||||||||||||| Sbjct 585583 ACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 585642 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | | || || | ||| || || || || ||||| | || || || | || Sbjct 585643 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 585702 Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||||||| || ||| || || || |||| ||| | || || || || Sbjct 585703 AATACCTTCTTTATCTTGAATCTTGCTCTT--GACATTGTCAATAGTATCAGAGGACTCA 585760 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| ||||| || || || |||||||||||| Sbjct 585761 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 585811 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | || |||| ||| | ||| || || || |||||||||||||| Sbjct 585811 ACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 585870 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | | || || | ||| || || || || ||||| | || || || | || Sbjct 585871 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 585930 Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||||||| || ||| || || || |||| ||| | || || || || Sbjct 585931 AATACCTTCTTTATCTTGAATCTTGCTCTT--GACATTGTCAATAGTATCAGAGGACTCA 585988 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| ||||| || || || |||||||||||| Sbjct 585989 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586039 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | || || | ||| | ||| || || || |||||||||||||| Sbjct 586039 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 586098 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | | || || | ||| || || || || ||||| | || || || | || Sbjct 586099 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 586158 Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||||||| || ||| || || || |||| ||| | || || || || Sbjct 586159 AATACCTTCTTTATCTTGAATCTTGCTCTT--GACATTGTCAATAGTATCAGAGGACTCA 586216 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| ||||| || || || |||||||||||| Sbjct 586217 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586267 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | || || | ||| | ||| || || || |||||||||||||| Sbjct 586267 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 586326 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | | || || | ||| || || || || ||||| | || || || | || Sbjct 586327 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 586386 Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||||||| || ||| || || || |||| ||| | || || || || Sbjct 586387 AATACCTTCTTTATCTTGAATCTTGCTCTT--GACATTGTCAATAGTATCAGAGGACTCA 586444 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| ||||| || || || |||||||||||| Sbjct 586445 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586495 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | || || | ||| | ||| || || || |||||||||||||| Sbjct 586495 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 586554 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | | || || | ||| || || || || ||||| | || || || | || Sbjct 586555 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 586614 Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||||||| || ||| || || || |||| ||| | || || || || Sbjct 586615 AATACCTTCTTTATCTTGAATCTTGCTCTT--GACATTGTCAATAGTATCAGAGGACTCA 586672 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| ||||| || || || |||||||||||| Sbjct 586673 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586723 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | || || | ||| | ||| || || || |||||||||||||| Sbjct 586723 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 586782 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | | || || | ||| || || || || ||||| | || || || | || Sbjct 586783 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 586842 Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||||||| || ||| || || || |||| ||| | || || || || Sbjct 586843 AATACCTTCTTTATCTTGAATCTTGCTCTT--GACATTGTCAATAGTATCAGAGGACTCA 586900 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| ||||| || || || |||||||||||| Sbjct 586901 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703775659520