Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq6 127 5e-24
seq2 125 2e-23
seq8 95.1 3e-14
>seq6
Length=935435
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || | || || ||||| ||||| |||| || || |||||
Sbjct 587175 CAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 587116
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||||| |||||||| ||| || ||| |||
Sbjct 587115 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 587056
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||| || ||||| | ||||||||||| ||| | ||||||||||| ||
Sbjct 587055 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586996
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || |||||| | || || |||||||||
Sbjct 586995 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586963
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || ||||| ||||| |||| || || |||||
Sbjct 585807 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 585748
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||||| |||||||| ||| || ||| |||
Sbjct 585747 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 585688
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||| || ||||| | ||||||||||| ||| | ||||||||||| ||
Sbjct 585687 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 585628
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || |||||| | || || |||||||||
Sbjct 585627 CAGAAGGAATCTACTTTGCATCTGGTTTTGAGA 585595
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || ||||| ||||| |||| || || |||||
Sbjct 586035 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 585976
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||||| |||||||| ||| || ||| |||
Sbjct 585975 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 585916
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||| || ||||| | ||||||||||| ||| | ||||||||||| ||
Sbjct 585915 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 585856
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || |||||| | || || |||||||||
Sbjct 585855 CAGAAGGAATCTACTTTGCATCTGGTTTTGAGA 585823
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || ||||| ||||| |||| || || |||||
Sbjct 586263 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 586204
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||||| |||||||| ||| || ||| |||
Sbjct 586203 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 586144
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||| || ||||| | ||||||||||| ||| | ||||||||||| ||
Sbjct 586143 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586084
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || |||||| | || || |||||||||
Sbjct 586083 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586051
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || ||||| ||||| |||| || || |||||
Sbjct 586491 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 586432
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||||| |||||||| ||| || ||| |||
Sbjct 586431 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 586372
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||| || ||||| | ||||||||||| ||| | ||||||||||| ||
Sbjct 586371 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586312
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || |||||| | || || |||||||||
Sbjct 586311 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586279
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || ||||| ||||| |||| || || |||||
Sbjct 586719 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 586660
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||||| |||||||| ||| || ||| |||
Sbjct 586659 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 586600
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||| || ||||| | ||||||||||| ||| | ||||||||||| ||
Sbjct 586599 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586540
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || |||||| | || || |||||||||
Sbjct 586539 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586507
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || ||||| ||||| |||| || || |||||
Sbjct 586947 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 586888
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||||| |||||||| ||| || ||| |||
Sbjct 586887 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 586828
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||| || ||||| | ||||||||||| ||| | ||||||||||| ||
Sbjct 586827 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586768
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || |||||| | || || |||||||||
Sbjct 586767 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586735
>seq2
Length=1385486
Score = 125 bits (138), Expect = 2e-23
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || ||| |
Sbjct 975611 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCA 975552
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| || || ||| |||||| | ||||| || || |||
Sbjct 975551 AAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 975492
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || |||||| |||| |||||| |||| || || || ||||| |||
Sbjct 975491 CAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCCACTCTACAC 975432
Query 206374 CTTGTTTTGAGA 206385
| ||| | |||
Sbjct 975431 TTGGTTCTAAGA 975420
>seq8
Length=676247
Score = 95.1 bits (104), Expect = 3e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || |||||||| ||| ||||||||| | || || |||
Sbjct 116021 ACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCTGACACTATTGACAATGTCAAGTCT 115962
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || || || || ||| |||||| | ||||| || || |||
Sbjct 115961 AAGATCCAAGACAAGGAGGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 115902
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || |||||| | || |||||| |||| || || || ||| | |||
Sbjct 115901 CAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACTTTGCAC 115842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819952043576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |