Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 seq8 82.4 6e-11 >seq6 Length=935435 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||| || || || ||||| || ||||| ||| |||| || || Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || || ||| || |||||||| | || ||| ||| Sbjct 587118 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 587059 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || || ||| |||||||| | |||| | |||||||||| Sbjct 587058 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586999 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||| | ||| |||| ||||| || || || || Sbjct 586998 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586952 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || || || || ||||| || ||||| ||| |||| || || Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || || ||| || |||||||| | || ||| ||| Sbjct 586206 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586147 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || || ||| |||||||| | |||| | |||||||||| Sbjct 586146 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586087 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||| | ||| |||| ||||| || || || || Sbjct 586086 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586040 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || || || || ||||| || ||||| ||| |||| || || Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || || ||| || |||||||| | || ||| ||| Sbjct 586434 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586375 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || || ||| |||||||| | |||| | |||||||||| Sbjct 586374 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586315 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||| | ||| |||| ||||| || || || || Sbjct 586314 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586268 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || || || || ||||| || ||||| ||| |||| || || Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || || ||| || |||||||| | || ||| ||| Sbjct 586662 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586603 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || || ||| |||||||| | |||| | |||||||||| Sbjct 586602 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586543 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||| | ||| |||| ||||| || || || || Sbjct 586542 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586496 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || || || || ||||| || ||||| ||| |||| || || Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || || ||| || |||||||| | || ||| ||| Sbjct 586890 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586831 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || || ||| |||||||| | |||| | |||||||||| Sbjct 586830 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586771 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||| | ||| |||| ||||| || || || || Sbjct 586770 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586724 >seq8 Length=676247 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||||||||| || || || ||||| || ||||| |||||| ||||| ||| | Sbjct 116048 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 115989 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || || ||| | | || || || || ||||| || || | || ||| Sbjct 115988 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 115929 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | ||| || || ||||| |||||| || |||| || || ||| Sbjct 115928 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 115869 Query 106437 AACATACAAAAAGAATCTAC 106456 ||||| ||||| ||||| || Sbjct 115868 AACATCCAAAAGGAATCCAC 115849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329325410048