Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 120 3e-22 seq8 109 6e-19 seq6 96.9 4e-15 >seq2 Length=1385486 Score = 120 bits (132), Expect = 3e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || | || | |||||| |||||||||||||| ||||||||||| | | Sbjct 975409 CCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 975468 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | ||| || | || || || ||||| ||||| | || || || || || Sbjct 975469 AAAGTTCT-ACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 975527 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| || Sbjct 975528 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 975587 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||| ||||| ||||| || ||||| || |||||| Sbjct 975588 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAA 975627 >seq8 Length=676247 Score = 109 bits (120), Expect = 6e-19 Identities = 147/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 |||||||||||||| ||||||||||| | ||| | | | | || || | || || || Sbjct 115849 GTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA-TCTTCCAATTGCTTACC 115907 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||| ||||| | || || || || || || || || || ||||| || || || Sbjct 115908 AGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGACTT 115967 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | ||||| || ||||| || || | ||||| || |||||||| ||||| Sbjct 115968 GACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAATAGTCTTACCGGTCAAAGT 116027 Query 134696 TTTAACGAAAATTTGCATTTTG 134717 || |||||||||||||| ||| Sbjct 116028 CTTGACGAAAATTTGCATCTTG 116049 >seq6 Length=935435 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || ||| || || || | || |||||||| || |||||||| ||| | || Sbjct 585595 TCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 585654 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || || || || || ||||| || ||||| | || || || || || || |||||||| Sbjct 585655 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 585714 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 |||||||| || ||||| ||| | || || || || || || || || || || Sbjct 585715 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 585774 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| |||||||| || ||||| || ||||| Sbjct 585775 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || ||| || || || | || |||||||| || |||||||| ||| | || Sbjct 585823 TCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 585882 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || || || || || ||||| || ||||| | || || || || || || |||||||| Sbjct 585883 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 585942 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 |||||||| || ||||| ||| | || || || || || || || || || || Sbjct 585943 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586002 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| |||||||| || ||||| || ||||| Sbjct 586003 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || ||| || || || | || |||||||| || |||||||| ||| | || Sbjct 586051 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 586110 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || || || || || ||||| || ||||| | || || || || || || |||||||| Sbjct 586111 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 586170 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 |||||||| || ||||| ||| | || || || || || || || || || || Sbjct 586171 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586230 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| |||||||| || ||||| || ||||| Sbjct 586231 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || ||| || || || | || |||||||| || |||||||| ||| | || Sbjct 586279 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 586338 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || || || || || ||||| || ||||| | || || || || || || |||||||| Sbjct 586339 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 586398 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 |||||||| || ||||| ||| | || || || || || || || || || || Sbjct 586399 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586458 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| |||||||| || ||||| || ||||| Sbjct 586459 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || ||| || || || | || |||||||| || |||||||| ||| | || Sbjct 586507 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 586566 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || || || || || ||||| || ||||| | || || || || || || |||||||| Sbjct 586567 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 586626 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 |||||||| || ||||| ||| | || || || || || || || || || || Sbjct 586627 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586686 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| |||||||| || ||||| || ||||| Sbjct 586687 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || ||| || || || | || |||||||| || |||||||| ||| | || Sbjct 586735 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 586794 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || || || || || ||||| || ||||| | || || || || || || |||||||| Sbjct 586795 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 586854 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 |||||||| || ||||| ||| | || || || || || || || || || || Sbjct 586855 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 586914 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| |||||||| || ||||| || ||||| Sbjct 586915 GGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || ||| || || || | || |||||||| || |||||||| ||| | || Sbjct 586963 TCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCC 587022 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || || || || || ||||| || ||||| | || || || || || || |||||||| Sbjct 587023 ATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 587082 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 |||||||| || ||||| ||| | || || || || || || || || || || Sbjct 587083 ATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGAT 587142 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| |||||||| || || ||||| ||||| Sbjct 587143 GGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398046221120