Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7 419 3e-112 seq4 251 1e-61 seq1 109 8e-19 >seq7 Length=810710 Score = 419 bits (464), Expect = 3e-112 Identities = 1462/2260 (65%), Gaps = 50/2260 (2%) Strand=Plus/Plus Query 68370 CAATG-TAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 ||||| | || ||||| | | || |||| || ||| | || ||||||||||| || | Sbjct 326300 CAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACCAGTCT 326359 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| ||| |||| ||||||||||||||||| || | ||| | ||||| | Sbjct 326360 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGGAGCAC 326419 Query 68489 CTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT 68548 || ||||| |||| ||||| ||||||||| || | | | ||| || ||||| | Sbjct 326420 GGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGCCATCT 326479 Query 68549 TTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAATCTGTTTGATATCATC 68606 || ||| | ||||||| |||||||||| |||||| | ||||| || | | | | Sbjct 326480 CGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTTCT--TG 326537 Query 68607 TGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663 |||| ||| |||||| ||||| ||| ||| | || || | ||| || Sbjct 326538 AGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCATACT 326597 Query 68664 ATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAA 68723 ||||| ||| | | || ||| | | || | | || || || ||||| || Sbjct 326598 ATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTTGGAA 326657 Query 68724 TTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 68783 ||| || |||||||| | ||||| ||| ||||| || ||||| || | | | || || Sbjct 326658 TTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACTCGTT 326717 Query 68784 ATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843 | || ||||| || | ||| || ||||||||||| || |||| | ||| ||||| Sbjct 326718 GTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGTTTCT 326777 Query 68844 AAGACCATGTGTTATGATT-TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTA 68902 || ||||| | |||| || |||| | ||| ||||||||| ||||| |||||| Sbjct 326778 AACACCATATTCCTTGATGCTTTTCTTCAAAGTGTC-CCAATCCCATAGATCCGATGGTT 326836 Query 68903 CAACATTCCAAAGATCGTATTGTAGAATTCCGTTAC---TTGCATATGATCCATTATATG 68959 ||||| |||||||| || | ||| || | | ||| | || || | ||| | Sbjct 326837 TGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGA---GAACCTTCATAAG 326893 Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019 | |||||||| |||| | || | ||||| || || || | | ||| || | Sbjct 326894 TGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGA 326953 Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079 | |||||||| || | | || ||||| | |||||| || || |||||| | | | Sbjct 326954 TAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCA 327013 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 | | ||||| | || ||||| || | || || | | | |||||||| | |||| ||| Sbjct 327014 ACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATAT 327073 Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTC 69199 | || || |||||| |||| || || || || ||| || | || || | || | Sbjct 327074 TAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTAC 327133 Query 69200 GGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATC-----GTC----CAT 69250 | | || || | | | | | ||| ||||||| | | ||| ||| Sbjct 327134 GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCAT 327193 Query 69251 CTATAACAAACAT--ATTCAG--TGCTACAG------ATGCTAGATTACAAACTGCTACC 69300 | || | ||| | || || || || || | || | |||||||| || | Sbjct 327194 C-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTC 327252 Query 69301 TCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCC 69360 |||| || || || | | || || ||| | ||| |||| || || ||| Sbjct 327253 TCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCC 327312 Query 69361 AGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCA 69420 | || | || || |||||| | |||||||| || |||||||| || || ||||||||| Sbjct 327313 AAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCA 327372 Query 69421 GTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTG 69480 || || | |||||||| | |||| | ||| | ||| || || ||||| Sbjct 327373 GTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATA---GTCTTT 327429 Query 69481 -TAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA 69537 || | | | || | || || ||| | ||| |||||||| || ||||| Sbjct 327430 CTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAACA 327489 Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT 69597 ||| ||| || ||| |||| ||||| | | ||| | ||| || ||| || | ||| Sbjct 327490 TCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACA 327549 Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCT 69657 |||||||| || | ||| |||||||| || ||| || | |||||| | | | | ||| Sbjct 327550 CGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCT 327609 Query 69658 TCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 69717 || || || || || | ||| | || || | || || | ||||||||||| Sbjct 327610 TCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCC 327669 Query 69718 AGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTG 69777 | || | || | | || || | ||| || || || ||||| | || | |||||| Sbjct 327670 AAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTG 327729 Query 69778 TTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATA 69837 || || |||| | | ||| || || | || || || |||| || || || | |||| Sbjct 327730 TTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATA 327789 Query 69838 TAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAG 69897 || || | | ||||| || || | ||| || || || || | ||||| Sbjct 327790 TATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAA 327849 Query 69898 ATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTA 69957 || | |||||| ||||| || || || |||||||| ||| ||||| ||||| Sbjct 327850 ATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCG 327909 Query 69958 AGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGAT 70017 | || ||||| |||||| ||| | || ||| || ||||| || | || ||||| Sbjct 327910 ATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAA 327969 Query 70018 GCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC 70077 || ||| |||| || | || | |||||| || || |||||||| || || || || Sbjct 327970 GCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCG 328029 Query 70078 -CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTT 70136 ||| |||||| || | || || | ||| | |||||| ||||| ||||| | || Sbjct 328030 TCACC-ATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTC 328088 Query 70137 ATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--T 70194 | |||||| ||| ||| || || ||||||||||| |||||||||||||| | | Sbjct 328089 ACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTT 328148 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATA 70254 |||| ||||| || |||| |||| |||| || | | |||||||| |||| | || || Sbjct 328149 GAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGATG 328206 Query 70255 TCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTG 70314 |||||||| | ||||| || ||||| | || || || || || ||||||||| Sbjct 328207 TCCATAACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTG 328266 Query 70315 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374 || || || || || | | ||| |||| | || | |||||| ||||| || || Sbjct 328267 AACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATA 328326 Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA-GCTGCTAT 70433 |||||||| || || | | ||||||| |||||||| || || || || || | Sbjct 328327 GCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGT-CATATACGCACAAGT 328385 Query 70434 TTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAAC 70493 ||| ||||| || | || ||||| | ||| || || || | ||| | || ||| | Sbjct 328386 TTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGAT 328445 Query 70494 TTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT 70553 | || || || | || ||| || | | | || |||||||| ||||| | Sbjct 328446 ACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGA 328505 Query 70554 AATACGAGATGTAATTTTATCAAACATAACATTCTCCTTA 70593 ||||| | ||||| || || ||| |||||| |||||| Sbjct 328506 TATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTTA 328545 >seq4 Length=1065440 Score = 251 bits (278), Expect = 1e-61 Identities = 597/893 (67%), Gaps = 28/893 (3%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| ||| || | || ||||||||||| || || || ||| || || || Sbjct 810920 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 810979 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATT---ATAtttttttttAAATCCTAATTCTGAA 39442 |||||||||||||| || ||||| | || | |||| || || || || | Sbjct 810980 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCTTGTTC---CCGAAAGCGACC 811036 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | | |||||| || || || || | ||| ||||||| || ||||| || | Sbjct 811037 AGTAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAAT 811096 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561 | ||| |||||||| || | | | | ||||||| |||| || ||||| || || || Sbjct 811097 AAAGAAACGGGTAGAGCATCGATGAAGTACCTCTTTT-CGATCTCGACGGCTTCAGTAAT 811155 Query 39562 TATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621 ||| | | | | | || || | ||||| ||| | || || || Sbjct 811156 AATCTTTTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGC 811215 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 || || ||||| || |||||||| | || |||||||||||||| || || || || Sbjct 811216 AAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGG 811275 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||||||||| ||| || | ||| || || |||||||| || || |||||||| || || Sbjct 811276 CATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACC 811335 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA---TTATGTATCCA 39798 ||| | || || || ||||| | ||||||| || | | | ||| | || ||||| Sbjct 811336 TTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCA 811395 Query 39799 CTTCTG--TGCCCAATCAGCTTTCTTCTTTACAC-AAGGCATTGTTTCTATAGCATTAAA 39855 |||| ||||| || || ||| |||||| | ||| || |||| || ||||| || Sbjct 811396 --TCTGATAGCCCATTCGGCCTTC-TCTTTAATCTGAGGAATGTTTTCAATCGCATTGAA 811452 Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915 | ||| |||| | ||| || | ||| ||||| |||||||| ||| | || Sbjct 811453 TAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTC 811512 Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975 ||| || |||||||| ||| || || || || || |||||| | ||||| | |||||| Sbjct 811513 TGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTG 811572 Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035 || |||| || || | || | ||||| ||||| ||||| |||||| || ||||| Sbjct 811573 CACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAA 811632 Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTATTCC 40088 || ||||| ||| | || ||| || |||| | | ||| | ||||||| Sbjct 811633 GAAGGCCAAGACACGGGAGATGAAAAATCTTTC----GTTCTCATTCATACGGTTATTCC 811688 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 | |||| ||||| || || | ||| | ||||| || ||||| ||||| |||||||| Sbjct 811689 AATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTC 811748 Query 40149 TTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTA 40201 | || ||| | ||| || ||| | |||| ||||| || | |||||||||| Sbjct 811749 TCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801 >seq1 Length=1424806 Score = 109 bits (120), Expect = 8e-19 Identities = 147/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCAT 69661 |||| || || || || ||||| || || | ||| |||||||||| ||| ||||||| | Sbjct 989190 TCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTT 989249 Query 69662 TTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 69721 | || || ||| ||| | ||||| || | || || | ||||||||| || |||| Sbjct 989250 TACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGAT 989309 Query 69722 ATATCGCCATGA-CTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 |||| || || | |||| || | || || || |||||||||| ||||| ||||||||| Sbjct 989310 ATAT-GCAATAAGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTA 989368 Query 69781 TTATAGACTCTCAGCATCGGAA 69802 || | || | ||||| |||| Sbjct 989369 TTGAAAACGCGAAGCATTGGAA 989390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908319163840