Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq7 419 3e-112
seq4 251 1e-61
seq1 109 8e-19
>seq7
Length=810710
Score = 419 bits (464), Expect = 3e-112
Identities = 1462/2260 (65%), Gaps = 50/2260 (2%)
Strand=Plus/Plus
Query 68370 CAATG-TAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428
||||| | || ||||| | | || |||| || ||| | || ||||||||||| || |
Sbjct 326300 CAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACCAGTCT 326359
Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488
||| ||| |||| ||||||||||||||||| || | ||| | ||||| |
Sbjct 326360 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGGAGCAC 326419
Query 68489 CTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT 68548
|| ||||| |||| ||||| ||||||||| || | | | ||| || ||||| |
Sbjct 326420 GGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGCCATCT 326479
Query 68549 TTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAATCTGTTTGATATCATC 68606
|| ||| | ||||||| |||||||||| |||||| | ||||| || | | | |
Sbjct 326480 CGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTTCT--TG 326537
Query 68607 TGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663
|||| ||| |||||| ||||| ||| ||| | || || | ||| ||
Sbjct 326538 AGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCATACT 326597
Query 68664 ATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAA 68723
||||| ||| | | || ||| | | || | | || || || ||||| ||
Sbjct 326598 ATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTTGGAA 326657
Query 68724 TTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 68783
||| || |||||||| | ||||| ||| ||||| || ||||| || | | | || ||
Sbjct 326658 TTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACTCGTT 326717
Query 68784 ATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843
| || ||||| || | ||| || ||||||||||| || |||| | ||| |||||
Sbjct 326718 GTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGTTTCT 326777
Query 68844 AAGACCATGTGTTATGATT-TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTA 68902
|| ||||| | |||| || |||| | ||| ||||||||| ||||| ||||||
Sbjct 326778 AACACCATATTCCTTGATGCTTTTCTTCAAAGTGTC-CCAATCCCATAGATCCGATGGTT 326836
Query 68903 CAACATTCCAAAGATCGTATTGTAGAATTCCGTTAC---TTGCATATGATCCATTATATG 68959
||||| |||||||| || | ||| || | | ||| | || || | ||| |
Sbjct 326837 TGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGA---GAACCTTCATAAG 326893
Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019
| |||||||| |||| | || | ||||| || || || | | ||| || |
Sbjct 326894 TGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGA 326953
Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079
| |||||||| || | | || ||||| | |||||| || || |||||| | | |
Sbjct 326954 TAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCA 327013
Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139
| | ||||| | || ||||| || | || || | | | |||||||| | |||| |||
Sbjct 327014 ACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATAT 327073
Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTC 69199
| || || |||||| |||| || || || || ||| || | || || | || |
Sbjct 327074 TAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTAC 327133
Query 69200 GGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATC-----GTC----CAT 69250
| | || || | | | | | ||| ||||||| | | ||| |||
Sbjct 327134 GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCAT 327193
Query 69251 CTATAACAAACAT--ATTCAG--TGCTACAG------ATGCTAGATTACAAACTGCTACC 69300
| || | ||| | || || || || || | || | |||||||| || |
Sbjct 327194 C-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTC 327252
Query 69301 TCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCC 69360
|||| || || || | | || || ||| | ||| |||| || || |||
Sbjct 327253 TCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCC 327312
Query 69361 AGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCA 69420
| || | || || |||||| | |||||||| || |||||||| || || |||||||||
Sbjct 327313 AAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCA 327372
Query 69421 GTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTG 69480
|| || | |||||||| | |||| | ||| | ||| || || |||||
Sbjct 327373 GTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATA---GTCTTT 327429
Query 69481 -TAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA 69537
|| | | | || | || || ||| | ||| |||||||| || |||||
Sbjct 327430 CTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAACA 327489
Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT 69597
||| ||| || ||| |||| ||||| | | ||| | ||| || ||| || | |||
Sbjct 327490 TCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACA 327549
Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCT 69657
|||||||| || | ||| |||||||| || ||| || | |||||| | | | | |||
Sbjct 327550 CGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCT 327609
Query 69658 TCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 69717
|| || || || || | ||| | || || | || || | |||||||||||
Sbjct 327610 TCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCC 327669
Query 69718 AGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTG 69777
| || | || | | || || | ||| || || || ||||| | || | ||||||
Sbjct 327670 AAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTG 327729
Query 69778 TTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATA 69837
|| || |||| | | ||| || || | || || || |||| || || || | ||||
Sbjct 327730 TTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATA 327789
Query 69838 TAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAG 69897
|| || | | ||||| || || | ||| || || || || | |||||
Sbjct 327790 TATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAA 327849
Query 69898 ATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTA 69957
|| | |||||| ||||| || || || |||||||| ||| ||||| |||||
Sbjct 327850 ATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCG 327909
Query 69958 AGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGAT 70017
| || ||||| |||||| ||| | || ||| || ||||| || | || |||||
Sbjct 327910 ATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAA 327969
Query 70018 GCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC 70077
|| ||| |||| || | || | |||||| || || |||||||| || || || ||
Sbjct 327970 GCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCG 328029
Query 70078 -CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTT 70136
||| |||||| || | || || | ||| | |||||| ||||| ||||| | ||
Sbjct 328030 TCACC-ATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTC 328088
Query 70137 ATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--T 70194
| |||||| ||| ||| || || ||||||||||| |||||||||||||| | |
Sbjct 328089 ACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTT 328148
Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATA 70254
|||| ||||| || |||| |||| |||| || | | |||||||| |||| | || ||
Sbjct 328149 GAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGATG 328206
Query 70255 TCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTG 70314
|||||||| | ||||| || ||||| | || || || || || |||||||||
Sbjct 328207 TCCATAACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTG 328266
Query 70315 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374
|| || || || || | | ||| |||| | || | |||||| ||||| || ||
Sbjct 328267 AACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATA 328326
Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA-GCTGCTAT 70433
|||||||| || || | | ||||||| |||||||| || || || || || |
Sbjct 328327 GCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGT-CATATACGCACAAGT 328385
Query 70434 TTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAAC 70493
||| ||||| || | || ||||| | ||| || || || | ||| | || ||| |
Sbjct 328386 TTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGAT 328445
Query 70494 TTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT 70553
| || || || | || ||| || | | | || |||||||| ||||| |
Sbjct 328446 ACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGA 328505
Query 70554 AATACGAGATGTAATTTTATCAAACATAACATTCTCCTTA 70593
||||| | ||||| || || ||| |||||| ||||||
Sbjct 328506 TATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTTA 328545
>seq4
Length=1065440
Score = 251 bits (278), Expect = 1e-61
Identities = 597/893 (67%), Gaps = 28/893 (3%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| ||||| ||| || | || ||||||||||| || || || ||| || || ||
Sbjct 810920 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 810979
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATT---ATAtttttttttAAATCCTAATTCTGAA 39442
|||||||||||||| || ||||| | || | |||| || || || || |
Sbjct 810980 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCTTGTTC---CCGAAAGCGACC 811036
Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502
| | |||||| || || || || | ||| ||||||| || ||||| || |
Sbjct 811037 AGTAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAAT 811096
Query 39503 AGTTTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561
| ||| |||||||| || | | | | ||||||| |||| || ||||| || || ||
Sbjct 811097 AAAGAAACGGGTAGAGCATCGATGAAGTACCTCTTTT-CGATCTCGACGGCTTCAGTAAT 811155
Query 39562 TATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621
||| | | | | | || || | ||||| ||| | || || ||
Sbjct 811156 AATCTTTTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGC 811215
Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681
|| || ||||| || |||||||| | || |||||||||||||| || || || ||
Sbjct 811216 AAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGG 811275
Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741
||||||||| ||| || | ||| || || |||||||| || || |||||||| || ||
Sbjct 811276 CATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACC 811335
Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA---TTATGTATCCA 39798
||| | || || || ||||| | ||||||| || | | | ||| | || |||||
Sbjct 811336 TTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCA 811395
Query 39799 CTTCTG--TGCCCAATCAGCTTTCTTCTTTACAC-AAGGCATTGTTTCTATAGCATTAAA 39855
|||| ||||| || || ||| |||||| | ||| || |||| || ||||| ||
Sbjct 811396 --TCTGATAGCCCATTCGGCCTTC-TCTTTAATCTGAGGAATGTTTTCAATCGCATTGAA 811452
Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915
| ||| |||| | ||| || | ||| ||||| |||||||| ||| | ||
Sbjct 811453 TAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTC 811512
Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975
||| || |||||||| ||| || || || || || |||||| | ||||| | ||||||
Sbjct 811513 TGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTG 811572
Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035
|| |||| || || | || | ||||| ||||| ||||| |||||| || |||||
Sbjct 811573 CACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAA 811632
Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTATTCC 40088
|| ||||| ||| | || ||| || |||| | | ||| | |||||||
Sbjct 811633 GAAGGCCAAGACACGGGAGATGAAAAATCTTTC----GTTCTCATTCATACGGTTATTCC 811688
Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
| |||| ||||| || || | ||| | ||||| || ||||| ||||| ||||||||
Sbjct 811689 AATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTC 811748
Query 40149 TTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTA 40201
| || ||| | ||| || ||| | |||| ||||| || | ||||||||||
Sbjct 811749 TCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801
>seq1
Length=1424806
Score = 109 bits (120), Expect = 8e-19
Identities = 147/202 (73%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCAT 69661
|||| || || || || ||||| || || | ||| |||||||||| ||| ||||||| |
Sbjct 989190 TCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTT 989249
Query 69662 TTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 69721
| || || ||| ||| | ||||| || | || || | ||||||||| || ||||
Sbjct 989250 TACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGAT 989309
Query 69722 ATATCGCCATGA-CTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780
|||| || || | |||| || | || || || |||||||||| ||||| |||||||||
Sbjct 989310 ATAT-GCAATAAGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTA 989368
Query 69781 TTATAGACTCTCAGCATCGGAA 69802
|| | || | ||||| ||||
Sbjct 989369 TTGAAAACGCGAAGCATTGGAA 989390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908319163840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |