Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq4 190 2e-43
seq2 107 2e-18
>seq4
Length=1065440
Score = 190 bits (210), Expect = 2e-43
Identities = 403/593 (68%), Gaps = 10/593 (2%)
Strand=Plus/Minus
Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755
||| ||||| | || ||||| |||| ||||| || |||||| ||| || | |||| |
Sbjct 811801 TAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAGA 811742
Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTG- 43814
||| || || ||||| || ||||| ||||| || | || || | |||||| |
Sbjct 811741 GGCTTCGTTCTGGACGGCCGAAGAGATTGATCTGTCGAAGGATATTCATGATTGGAATAA 811682
Query 43815 -CATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
| | || | || |||| | ||| || || || ||||| || ||||||||
Sbjct 811681 CCGTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCTC 811622
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAG 43931
|| || ||||| ||||| ||||| ||| || | | ||| ||||| ||| | ||||
Sbjct 811621 TGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCA-GAAGTGCAAATTCCAG 811563
Query 43932 AAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACA 43991
|||| |||||| ||||| || ||||| || ||||| ||||| || || | ||
Sbjct 811562 AAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATT 811503
Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC-ATCGATTGTTTAATGCG 44050
|| | || ||||| || ||||| ||| | || |||| || || || ||||||
Sbjct 811502 CCCTGTTAATTGATACTTATATCAAGGATCCAAAGGA-AAGCGATTTCTTATTCAATGCG 811444
Query 44051 ATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCA 44110
|| |||| | ||| ||||||| | || || || ||||| | | |||||| |
Sbjct 811443 ATTGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCAGGAC 811384
Query 44111 AATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTT 44167
| ||| ||| || | ||| || | || || || || | | ||||| |||||||||
Sbjct 811383 AGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGTATTTTCTTT 811324
Query 44168 TCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227
||||| || ||||| || || || ||||| ||||| |||| | ||||| || | |||
Sbjct 811323 TCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACG 811264
Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280
||||| || || || || | | |||||||| |||||| ||||||||| ||
Sbjct 811263 TTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCATG 811211
>seq2
Length=1385486
Score = 107 bits (118), Expect = 2e-18
Identities = 349/533 (65%), Gaps = 33/533 (6%)
Strand=Plus/Minus
Query 40761 GGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAATGCGCACAGT 40820
||||||||| ||| |||||| |||| || || || | |||||| | | | |
Sbjct 927786 GGTTGTACTGATGGTAAGAAGCTATCTGAGCAGGGGGTCAAAATTTGGGAGGGAAATGGA 927727
Query 40821 TCTAAAACATAT-TTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCC 40879
|||| | || ||| ||| | ||||| || || || ||| || ||| | || ||
Sbjct 927726 TCTAGAGAGTACCTTGATAAGC-TGGGATTGCACGAGAGACGTGAGGGAGATTTGGGGCC 927668
Query 40880 TGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATAT--GACA--CTATGTACTCTG 40935
|||||||||||||| | | | |||||||| || ||||| |||| | ||| || |
Sbjct 927667 GGTTTATGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACATGCGATG-AC---G 927612
Query 40936 ATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGAT----ACGATTAAATCC 40991
| || || ||||| | |||||||| | || | | ||| | | | || |
Sbjct 927611 ACTACACTGGCCAAGGATTTGATCAATT---GGCCGATTT-GATCTCAAAGCTAAAGAAC 927556
Query 40992 GATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATG 41051
|||| | | || | || || || | || ||||| ||| | || | | | ||||
Sbjct 927555 AATCCATACGACAGAAGAATCATCATGAGTGCATGGAATCCACCAGATTTCCCATCGATG 927496
Query 41052 GCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT-----TTGC----AATGGTGA- 41101
|| ||||| || |||||| | || | |||||| || || || | ||||| |
Sbjct 927495 GCTTTGCCGCCATGTCATGTCTTTTCTCAGTTCTATGTCAGTTTTCCTGAGAATGGAAAG 927436
Query 41102 -----ACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTT 41156
||| || |||| | ||||||||||||| |||| ||||||||||| || || ||
Sbjct 927435 CCAAGACTTTCTTGTCTACTGTATCAAAGATCCTGTGATATGGGACTAGGAGTGCCCTTC 927376
Query 41157 AACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCT 41216
||||| || ||||| || || || | ||| |||| || || | || | |||||
Sbjct 927375 AACATTGCATCGTATGCGCTTCTGACCAAGATGGTTGCCCATGTCTGCGATATGGAACCT 927316
Query 41217 GGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGA 41269
||||| ||| |||| || | || |||| ||| |||||| ||||||| ||
Sbjct 927315 GGTGAGTTTATTCATACCATGGGTGATGCTCATGTTTACAAAGATCACATCGA 927263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455728736280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |