Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7 286 4e-72 seq1 100 4e-16 >seq7 Length=810710 Score = 286 bits (316), Expect = 4e-72 Identities = 907/1393 (65%), Gaps = 35/1393 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | |||||||| || || || || || | ||| | || || | || || Sbjct 326682 GTACATATTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCTAGAATCTGGGAAGTCGA 326741 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824 || ||||||||||| |||| | ||||| ||| | || ||| | |||||||||| | Sbjct 326742 CGCAGTTGGCATTGGGGCCAATAGCAAAGA--GTTTCTAACACCATATTCCTTGATGCTT 326799 Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATGTCAAACT 110882 | ||| | | ||||| || | | || | |||||| |||| ||| || ||| Sbjct 326800 TTCTTCAAAGTGTCCCAATCCCA-TAGATCCGATGGTTTGGTGTTCC-ACAGATCGTACT 326857 Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGG----AACCTTGGGCT 110938 | | | ||||| || |||||||| ||| | || || | | |||| || Sbjct 326858 GCAAAATACCTTGAGAGATTGGAGAACCTTCATAAGTGGAGTAAGGTCCATCCTT---CT 326914 Query 110939 TCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998 || ||||| |||||| || |||| || ||||| || || ||||| ||||| | Sbjct 326915 TC-GCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAAGATTTGGATG 326973 Query 110999 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 111058 || | ||||||||||| | || ||||||| || ||| ||||| || || || Sbjct 326974 TTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAACATCATAAACACGTCAGCC 327033 Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118 | ||| | ||||| | | | |||||||||| || ||||||||| |||| || | Sbjct 327034 AAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCTAGCTTCAGGA 327093 Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178 || || || | |||| || ||||| ||| | || || | || ||| | ||| Sbjct 327094 ACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTACGAGTGATAACCTTGGCAATT 327153 Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT------CTTCA-----TTGAC-ATAC 111226 | ||| | || || ||||| | | |||| | ||| |||| | || Sbjct 327154 TTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCATCATCAGCAACTTGAATACAC 327213 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||||| || ||||| || ||||| || |||||||| ||| |||||| Sbjct 327214 GATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACTCA 327273 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | ||||| ||| ||||| || ||||| || ||||| ||||||||||| ||||| Sbjct 327274 ACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCCAAGTTCTTTTGGTTGCTCTTT 327333 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 | || || ||||| ||||| |||||| | || || || ||||| || || |||| | Sbjct 327334 ATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCAGTCTCTGTTTGAGATTCCAAG 327393 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 ||||| | ||| | | ||| | | | | | || || || || |||| Sbjct 327394 ATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTTCAGCGACGTAA 327453 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526 | || | ||||||||| || ||||| | || || | |||||| || | | Sbjct 327454 CGTTCATACAAGGCTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTT 327513 Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 ||| |||| | || ||||| |||| || | ||| || |||||||| | ||||||||| Sbjct 327514 GGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATC 327573 Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 111646 || |||| || || | |||||| ||| |||||| | ||| ||||| || | Sbjct 327574 CAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATA 327633 Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC---- 111702 || | ||| || | ||| || ||||||||||| || | || | |||| || || Sbjct 327634 TCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGC 327693 Query 111703 CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762 |||| | || | |||||| ||||| || || ||| ||| || || || | ||| || Sbjct 327694 CTTTTGTTACC-ACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGG 327752 Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 111822 || | || | || ||| || || || |||| || | | | | | Sbjct 327753 GATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGTT 327812 Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 || ||||||| |||||||| ||||| ||| || || ||||| ||| | | ||| Sbjct 327813 GTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGT 327872 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 | || ||||| | ||| ||||| ||||| ||||||| ||||| || |||||||| Sbjct 327873 ATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTG 327932 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGG 112001 || | ||| |||||||||||||| || ||||| | || |||||||| || || || Sbjct 327933 AGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAA-GTATCTCAAGG 327991 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 ||||| | || ||||| | |||| || ||||| || || || || || | || | Sbjct 327992 ACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAA 328051 Query 112062 CCCGCATGAACAT 112074 | | ||| | ||| Sbjct 328052 CTCTCATAATCAT 328064 >seq1 Length=1424806 Score = 100 bits (110), Expect = 4e-16 Identities = 185/267 (69%), Gaps = 7/267 (3%) Strand=Plus/Plus Query 111503 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACC 111562 ||| | || || || |||| ||||||| || | | |||| | ||| ||| ||| Sbjct 989126 TCGCATAGTCCAGGGGCCTCATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACC 989185 Query 111563 CGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCT 111622 ||| ||||||| ||||| || |||||||| | |||| |||||||| | ||| Sbjct 989186 CGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCT 989245 Query 111623 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 111682 || | ||| ||||| ||| | || || || || | ||| ||||| ||||||||||| Sbjct 989246 TCTTTACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCG 989305 Query 111683 AGATAGACTGCGAT-AGATC----CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTG 111737 ||||| | ||| || || || ||| | | | ||| | |||| |||||| | || | Sbjct 989306 AGATATA-TGCAATAAGCTCCGGGCCTCTTGTTG-CCACCCTGATCTACATATCTTGCAG 989363 Query 111738 TGGCGTTAAATACGCGAAGCATTGGAA 111764 || || || |||||||||||||||| Sbjct 989364 TGTTATTGAAAACGCGAAGCATTGGAA 989390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031560377600