Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq7 277 2e-69 seq1 120 4e-22 >seq7 Length=810710 Score = 277 bits (306), Expect = 2e-69 Identities = 947/1467 (65%), Gaps = 23/1467 (2%) Strand=Plus/Minus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 104197 ||||| | | ||||| |||||||| ||||||| || ||| ||||| | || Sbjct 328157 AGAGATTTCAACTTTAACTATTTTGGGTTCAAAACTCTGGAGCGTTCTTATCTGCTGAGG 328098 Query 104198 CTCGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATT 104257 | |||||| | ||| || || | ||| | ||| | || || | |||||| Sbjct 328097 ATAAATGGTGAAGTCGCTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATT 328038 Query 104258 CATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTT 104316 ||||| || ||||| || |||| | ||||| || | ||||||| || || || Sbjct 328037 CATGGTGACGACATCGAGTCTGCTATTGAGACTTATAATCTGATGTCCTTGAGATAC-TT 327979 Query 104317 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTG 104376 |||||| || | ||||| || |||||||||||||| ||| | || || ||||| || Sbjct 327978 CATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCATG 327919 Query 104377 CTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTG 104436 ||||| ||||||| ||||| ||||| ||| | ||||| || | ||| | | ||| || Sbjct 327918 TTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAATG 327859 Query 104437 TGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAA 104496 ||| || || ||| ||||| |||||||| ||||||| || | | | | | Sbjct 327858 TGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACACAACATTCGTTCTAC 327799 Query 104497 TAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGT 104556 || |||| || || || ||| || | || | || || ||| | || || Sbjct 327798 GGGTTCATATATTGCAGGTACTAACGGTACTTCGAACGGGTTGATCCCCATGGTACGTGT 327739 Query 104557 ATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCG 104612 || ||| ||| || || ||||| |||||| | || | |||| || || ||| Sbjct 327738 CTTCAACAACACTGCTCGTTATGTGGATCAAGGT-GGTAACAAAAGGCCAGGTGCTTTCG 327680 Query 104613 CAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACC 104672 | | || | || ||||||||||| || ||| | || ||| | || | || |||| Sbjct 327679 CTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCGGAAGAACC 327620 Query 104673 AAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTC 104731 | ||| | || ||| | |||| | ||| | ||| | || ||||||||||||||| | Sbjct 327619 ACGGTAAGGAAGAGATTC-GTGCAAGAGATTTGTTCCCAGCCCTCTGGATTCCAGATTTG 327561 Query 104732 TTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCT 104791 |||||||| | ||| | |||| ||| | ||| || | || | |||| | || || Sbjct 327560 TTCATGAAACGTGTTCAAGAGAATGGTGAATGGACTTTGTTCTCTCCAAGTGAAGCTCCA 327501 Query 104792 GGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAA 104851 ||| | || |||| ||||| || ||||||||| | || | |||| | ||| Sbjct 327500 GGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTGTATGAACGTTACGTCGCTGAA 327441 Query 104852 GGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAA 104911 ||||| | | ||| | |||| | ||||| | ||||| | | |||||| Sbjct 327440 GGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACGCTATCTTGGAATCTCAA 327381 Query 104912 ACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAA 104971 || ||||||||||| |||| ||||||||||||||| |||||||| |||||| || ||| Sbjct 327380 ACAGAGACTGGTACTCCATTCATGCTTTACAAAGATGCCTGTAATATAAAGAGCAACCAA 327321 Query 104972 AAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGAC 105031 ||||| |||||| || || || || | ||| |||||| | || | ||| Sbjct 327320 AAGAACTTGGGTACCATTAAATCCTCTAACTTGTGTTGTGAAATCGTTGAGTACTCAGCA 327261 Query 105032 AAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC----------CAAGT- 105080 |||||||| || || |||||| | || || |||||| | || ||||| Sbjct 327260 CCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTACCATCGTGTATTCAAGTT 327201 Query 105081 -ATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACT 105139 || ||| |||| || | ||||| || || | || || || | || | Sbjct 327200 GCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGCATAAAATTGCCAAGGTT 327141 Query 105140 GTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGT 105199 |||| ||| | |||| || || ||| |||| | ||||| ||| ||| | Sbjct 327140 ATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACCCAGTTCCTGAAGCTAGA 327081 Query 105200 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTC 105259 || |||||||||||| || | || || | ||| ||||| | ||| | || || || || Sbjct 327080 AACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATGGTTTGGCTGACGTGTTT 327021 Query 105260 ATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 || | | || ||||||| || | ||||| ||||| | || | || || Sbjct 327020 ATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATCTAAACATCCAAATCTTC 326961 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCA 105379 || || || || ||||| || | || || | |||||||| || ||||| || Sbjct 326960 GAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGGCGAAGAAGGATGGACCT 326901 Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 105439 || || | ||| ||||||||| || ||||| | | || | ||| ||| |||| Sbjct 326900 TACTCCACTTATGAAGGTTCTCCAATCTCTCAAGGTATTTTGCAGTACGATCTGT-GGAA 326842 Query 105440 GGTGAGACCA-AGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGG 105498 | |||| | || | || ||||| || | ||| || |||||||||| | || Sbjct 326841 CACCAAACCATCGGATCTATGGGATTGGGACACTTTGAAGAAAAGCATCAAGGAATATGG 326782 Query 105499 TCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | || | ||| | | || |||| ||||||||||| || || || | || || | || Sbjct 326781 TGTTAGAAACTCTTTGCTATTGGCCCCAATGCCAACTGCGTCGACTTCCCAGATTCTAGG 326722 Query 105559 TAATAATGAATGCTTTGAACCCTACAC 105585 | | || || || || || || ||||| Sbjct 326721 TTACAACGAGTGTTTCGAGCCATACAC 326695 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 154116 TTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTTG 154175 |||| || |||||||||| || || |||||||| || ||| || || || || || | Sbjct 457499 TTGCCCCCAGATCTGGTCTAGCAGTCAAACATGGGATTCAAACCGGCGCTGGAGTGGTCG 457440 Query 154176 ATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTTTG 154235 || |||||||| ||||||||||||||||| ||||| || || |||| || || | Sbjct 457439 ATAGGGACTACACTGGTGAAGTCAAAGTCGTGCTTTTTAACCATTCTAACAAGGATTTCG 457380 Query 154236 AGGTAAAGAGGGGTGA 154251 || | || | ||||| Sbjct 457379 AGATTAACAAAGGTGA 457364 >seq1 Length=1424806 Score = 120 bits (132), Expect = 4e-22 Identities = 278/408 (68%), Gaps = 17/408 (4%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 |||||||||||||| |||||||||||| | || | ||| | |||||| |||||| | Sbjct 446931 AAACCATCCATCTCAACCAAAAGTTGGTTCAAGGTATTTTCTCTTTCATCGTTCGCTC-C 446873 Query 9674 ATACCACCAGCACT---GCGTTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACGAT 9729 | || || | ||||||| ||| |||||||| ||||| |||||||| || Sbjct 446872 TGAAATGTTGCCCTTTTGTCTTGCTTTACCAATAGCATCAATTTCATCGATGAAGACCAT 446813 Query 9730 GCATGGTTGATTTTCGCGAGCGA-CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 9788 |||| || || | |||| ||| || || || || || | | || || |||| Sbjct 446812 AGATGGAGCGTTCTCCCTAGCGGTCTTGAACAAG-TCACGCACTCTCGAAGCACCGACAC 446754 Query 9789 CAACAAACATCTCCACAAAGTTTGCGG----CGGAACATTGGATGAAGGGGACATTAGAT 9844 | |||||||| || ||||| | ||| || |||| | | ||| ||||| || | Sbjct 446753 CGACAAACATTTCAACAAACT---CGGAACCCGAAACAAAGAA-GAATGGGACTCCAGCT 446698 Query 9845 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 9904 ||||| ||| |||| || | ||||||||||| |||||||| ||| | ||| | Sbjct 446697 TCACCAGCAGTGGCCTTAGCCAATAGAGTCTTACCAGTACCTGGAGGACCAGAGAGAATA 446638 Query 9905 GCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTT-AAGAAAATC 9963 ||||||| ||||||||| || || || |||||||| ||||| || |||||| | Sbjct 446637 GCACCTCTTGGAATCTTAGCTCCCATTTTTTCGTATCTCTTAGGTTCTTTCAAGAAACT- 446579 Query 9964 CACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 10011 || | || | ||| |||||||| ||||| || ||||||| Sbjct 446578 GACGAACTCCATAATTTCCTCTTTGGCTTCGTCACATCCGGCAACATC 446531 Score = 100 bits (110), Expect = 3e-16 Identities = 186/269 (69%), Gaps = 7/269 (3%) Strand=Plus/Minus Query 104541 TTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAA 104600 |||||||||||||||| || || ||| || | |||||| |||| | ||| | | | Sbjct 989390 TTCCAATGCTTCGCGTTTTCAATAACACTGCAAGATATGTAGATCAGGGTGG-CAACAAG 989332 Query 104601 AGG----GATCT-ATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCT 104655 ||| || || || ||| | ||||| ||||||||||| ||||| ||| | || || || Sbjct 989331 AGGCCCGGAGCTTATTGCA-TATATCTCGAGCCATGGCATGCGGACATCCTTGATTTTCT 989273 Query 104656 TGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCT 104715 || | || ||||| ||| | || || | | | | ||||| || | || || Sbjct 989272 ACAGCTTCGAAAGAACCACGGTAAAGAAGAAATGAGAGCCAGAGATCTGTTTTTTGCGCT 989213 Query 104716 CTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTG 104775 ||||| || || || ||||||| | | || ||| | |||| |||||| | | ||| | Sbjct 989212 GTGGATACCTGACCTGTTCATGAGGCGGGTCGAGTCCAATGGCGATTGGTGTTTGTTTAG 989153 Query 104776 TCCAGACAAGGCACCTGGTCTCTCCGATG 104804 |||||| |||| ||||| || | ||||| Sbjct 989152 TCCAGATGAGGCCCCTGGACTATGCGATG 989124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260391717440