Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq7 123 3e-23 seq1 82.4 8e-11 >seq7 Length=810710 Score = 123 bits (136), Expect = 3e-23 Identities = 337/511 (66%), Gaps = 14/511 (3%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACATA 19173 ||| |||| || || || || ||||| |||||| || ||||| || ||||| || Sbjct 328058 ATGAGAGTTGCTGTTGGTATTCATGGTGACGACATC----GAGTCTGCTATTGAGACTTA 328003 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 | |||||| | || | ||||| || || | || || |||||||| || ||||| Sbjct 328002 TAATCTGATGTCCTTGAGATACTTCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTAC 327943 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 ||| |||||||| ||||||||| | || |||||||||||| ||| ||||| Sbjct 327942 TCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGG 327883 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGAT 19353 || ||||| || | ||||| || || || || ||| | || ||||| || | Sbjct 327882 TATTTACGATACTTTGAAGGAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTT 327823 Query 19354 CCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 ||| | | | || || || || | ||| || || || || ||||| | Sbjct 327822 GCACATACAC-AACATTCGTTCTACGGGTTCATATATTGCAGGTACTAACGGTACTTCGA 327764 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||| | |||| ||| | || |||||||||||||| || | || || | || || | Sbjct 327763 ACGGGTTGATCCCCATGGTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTG 327704 Query 19473 GCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530 | |||| | || | ||| ||||| | ||| | || ||||||||||| ||| || | Sbjct 327703 GTAACAAAAGGCCAGGTGCT--TTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTT 327646 Query 19531 GGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTT 19590 |||||| | || | || |||||| ||| | || ||||| || | || | || Sbjct 327645 TGATTTCATAGATATCCGGAAGAACCACGGTAAGGAAGAGATTCGTGCAAGAGATTTGTT 327586 Query 19591 CACGGCCTTGTGGATTCCGGACCTATTCATG 19621 | | ||| | |||||||| || | |||||| Sbjct 327585 CCCAGCCCTCTGGATTCCAGATTTGTTCATG 327555 Score = 116 bits (128), Expect = 4e-21 Identities = 540/841 (64%), Gaps = 22/841 (3%) Strand=Plus/Plus Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGG-GCTAGAAACCTCGATGATTTCTGTGCA 79115 || |||| ||| || ||||| ||||| || || ||| || ||| | |||||| || Sbjct 327229 GAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCT-GAGTACTCAACGATTTCACAACA 327287 Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175 ||| ||||| || || ||||| || | |||||| ||||||||||| |||||||| || Sbjct 327288 CAAGTTAGAGGATTTAATGGTACCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATC 327347 Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGAT 79235 ||||| |||| | || || || ||||| ||| | | | ||| ||| | Sbjct 327348 TTTGTAAAGCATGAATGGAGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAG 327407 Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTAC--CGACCCTGTGCGACGT-ACGTCCGGTACAA 79292 | | || || | || || ||| ||||| | ||||||| |||| | ||||| Sbjct 327408 TTTTTGAGCTTTGATAGTCT--TTCTACCACGACCTTCAGCGACGTAACGTTC-ATACAA 327464 Query 79293 CTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGG----GCACTCGTGCGGGCACA 79348 | | || | || ||||| ||||| | || || || |||| | | | | ||| Sbjct 327465 GGCTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTTG-GAGAGAACA 327523 Query 79349 TCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGG 79408 | || ||| || | | || | ||| | |||||| | || || ||||| |||| Sbjct 327524 --AAGT-CCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGG 327580 Query 79409 CCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAA 79468 | | ||| | || | ||| ||||| || | || |||||| || | || | | Sbjct 327581 CTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGA 327640 Query 79469 AGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGC 79528 | || | |||||| |||||||| || |||| || | ||||| | ||| | ||| Sbjct 327641 AATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGT 327700 Query 79529 CGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGC 79588 || || || | || || || || ||||||||||| || || | |||||| | | | Sbjct 327701 TACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACC 327760 Query 79589 CGTCGGCGACG--CCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA 79646 ||| ||| | ||||| || || || || ||| | | |||||||| | | | Sbjct 327761 CGT--TCGAAGTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGTT-GTGTA 327817 Query 79647 -GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGT 79705 ||| | || || || || | ||| || || || || ||||| | || |||| Sbjct 327818 TGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGT 327877 Query 79706 AGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGT 79765 | || |||||||| ||||| |||||||| |||| ||||| || |||||||| ||| Sbjct 327878 AAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGC 327937 Query 79766 TGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCA 79825 ||||| || ||||| || || || | || || ||||| | | | ||||| Sbjct 327938 GTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCA 327997 Query 79826 GATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCA 79885 ||| || ||||| | | | || |||||| || || || || || || || | || Sbjct 327998 GATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCA 328057 Query 79886 T 79886 | Sbjct 328058 T 328058 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| | || |||||||| || ||||| | |||||||||||| ||||| | ||||||| Sbjct 326333 GTGTCCTCAGGTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAC 326392 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | || || ||| | | || ||| ||||| | || |||||||| |||| Sbjct 326393 TAGTCAATTTACCCATAGTTGGAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGA 326452 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 |||| || | || || || ||||| ||||||| | ||||| | || ||||| | | Sbjct 326453 TGTAAACAGCACGATCAGCTGCCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAG 326512 Query 78368 TCCGGTAAATGGCCTTCAGCTCTT 78391 || ||| | |||| || |||| Sbjct 326513 TCTTGTACAAATCCTTTAGTTCTT 326536 >seq1 Length=1424806 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 19421 GTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAA- 19479 || |||||||| ||||| ||||| ||||| || || || || | ||||| ||| ||| Sbjct 989391 GTTCCAATGCTTCGCGTTTTCAATAACACTGCAAGATATGTAGATCAGGGTGGCAACAAG 989332 Query 19480 ACGCAAGG-GCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCC 19538 | || || ||| || ||| || |||||||||||||| |||||| || | ||||| | Sbjct 989331 AGGCCCGGAGCTTATTG--CATATATCTCGAGCCATGGCATGCGGACATCCTTGATTTTC 989274 Query 19539 TCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCT 19598 | | || || |||||| ||| | || || ||| | | || || || || Sbjct 989273 TACAGCTTCGAAAGAACCACGGTAAAGAAGAAATGAGAGCCAGAGATCTGTTTTTTGCGC 989214 Query 19599 TGTGGATTCCGGACCTATTCATG 19621 ||||||| || ||||| |||||| Sbjct 989213 TGTGGATACCTGACCTGTTCATG 989191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524416032640