Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq7 116 4e-21
seq4 86.0 7e-12
>seq7
Length=810710
Score = 116 bits (128), Expect = 4e-21
Identities = 294/437 (67%), Gaps = 10/437 (2%)
Strand=Plus/Minus
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
||||| | || || | ||||| || ||||| |||||||| | ||||||||||||
Sbjct 327983 TACTTCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCT 327924
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
|| ||||| | || |||||||||||||| ||||| || || ||||| || | |||
Sbjct 327923 TCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAG 327864
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448
|| ||||| || || ||| | |||||||| ||| | ||| | | | ||| | ||
Sbjct 327863 GAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACAC-AACATTCG 327805
Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCCTATG 53506
| | | || || || || || ||||| | ||| | || | | || |||
Sbjct 327804 TTCTACGGGTTCATATATTGCAGGTACTAACGGTACTTCG--AACGGGTTGATCCCCATG 327747
Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT-GGGAAGCGCAAGGG 53565
| || |||||||||||||| || || || || | || |||||| || || |||
Sbjct 327746 GTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGCCAGGT 327687
Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625
| | ||||| | ||| | || || |||||||| ||||| | || || | || | ||
Sbjct 327686 G-CTTTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCG 327628
Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTC 53684
||| || ||| | |||||||| || ||| | || |||| |||| || |||||||
Sbjct 327627 GAAGAACCACGGTAAGGAAGAGATTCG-TGCAAGAGATTTGTTCCCAGCCCTCTGGATTC 327569
Query 53685 CGGACCTCTTCATGCAA 53701
| || | |||||| ||
Sbjct 327568 CAGATTTGTTCATGAAA 327552
Score = 98.7 bits (108), Expect = 1e-15
Identities = 164/234 (70%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 55694 GGGTCCGTCCAGAATCT---GGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTG 55750
|| ||| |||| ||||| | | ||||||| || ||||| | ||| ||| ||
Sbjct 326567 GGCTCCATCCAAAATCTACCGAATATTCCTCAAGAACTAAAGGATTTGTACAAGACTGTT 326508
Query 55751 TGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGAC 55810
||||| || | || || | | | || || ||| |||||||||| || ||||||||
Sbjct 326507 TGGGAAATCTCTCAAAAAACTATCATCGAGATGGCAGCTGATCGTGCTGTTTACATCGAT 326448
Query 55811 CAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-AT 55869
|||||||| || ||||||| ||| ||| | ||| || |||| || | ||
Sbjct 326447 CAGTCCCAATCATTGAACATTCACATCCGTGCTCCAACTATGGGTAAATTGA-CTAGTAT 326389
Query 55870 GCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923
||| || ||||| ||||||||||| | ||||| ||||||||||| ||| ||||
Sbjct 326388 GCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGTACTACCTGAGGAC 326335
>seq4
Length=1065440
Score = 86.0 bits (94), Expect = 7e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810
||||| || ||| | ||||||||||||| |||||||| || ||||||| || ||
Sbjct 811214 GCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCT 811273
Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870
||||| || || |||||||||||| ||||| ||| |||||||| ||||| ||
Sbjct 811274 GGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATA 811333
Query 74871 CCTTC 74875
|||||
Sbjct 811334 CCTTC 811338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215616948800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |