Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq7 116 4e-21 seq4 86.0 7e-12 >seq7 Length=810710 Score = 116 bits (128), Expect = 4e-21 Identities = 294/437 (67%), Gaps = 10/437 (2%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| | || || | ||||| || ||||| |||||||| | |||||||||||| Sbjct 327983 TACTTCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCT 327924 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||||| | || |||||||||||||| ||||| || || ||||| || | ||| Sbjct 327923 TCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAG 327864 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448 || ||||| || || ||| | |||||||| ||| | ||| | | | ||| | || Sbjct 327863 GAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACAC-AACATTCG 327805 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCCTATG 53506 | | | || || || || || ||||| | ||| | || | | || ||| Sbjct 327804 TTCTACGGGTTCATATATTGCAGGTACTAACGGTACTTCG--AACGGGTTGATCCCCATG 327747 Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT-GGGAAGCGCAAGGG 53565 | || |||||||||||||| || || || || | || |||||| || || ||| Sbjct 327746 GTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGCCAGGT 327687 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 | | ||||| | ||| | || || |||||||| ||||| | || || | || | || Sbjct 327686 G-CTTTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCG 327628 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTC 53684 ||| || ||| | |||||||| || ||| | || |||| |||| || ||||||| Sbjct 327627 GAAGAACCACGGTAAGGAAGAGATTCG-TGCAAGAGATTTGTTCCCAGCCCTCTGGATTC 327569 Query 53685 CGGACCTCTTCATGCAA 53701 | || | |||||| || Sbjct 327568 CAGATTTGTTCATGAAA 327552 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/234 (70%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 55694 GGGTCCGTCCAGAATCT---GGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTG 55750 || ||| |||| ||||| | | ||||||| || ||||| | ||| ||| || Sbjct 326567 GGCTCCATCCAAAATCTACCGAATATTCCTCAAGAACTAAAGGATTTGTACAAGACTGTT 326508 Query 55751 TGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGAC 55810 ||||| || | || || | | | || || ||| |||||||||| || |||||||| Sbjct 326507 TGGGAAATCTCTCAAAAAACTATCATCGAGATGGCAGCTGATCGTGCTGTTTACATCGAT 326448 Query 55811 CAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-AT 55869 |||||||| || ||||||| ||| ||| | ||| || |||| || | || Sbjct 326447 CAGTCCCAATCATTGAACATTCACATCCGTGCTCCAACTATGGGTAAATTGA-CTAGTAT 326389 Query 55870 GCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 ||| || ||||| ||||||||||| | ||||| ||||||||||| ||| |||| Sbjct 326388 GCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGTACTACCTGAGGAC 326335 >seq4 Length=1065440 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || ||| | ||||||||||||| |||||||| || ||||||| || || Sbjct 811214 GCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCT 811273 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| || || |||||||||||| ||||| ||| |||||||| ||||| || Sbjct 811274 GGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATA 811333 Query 74871 CCTTC 74875 ||||| Sbjct 811334 CCTTC 811338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215616948800