Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq8 127 2e-24 seq7 127 2e-24 seq6 122 1e-22 seq2 107 2e-18 >seq8 Length=676247 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| | || || || || | Sbjct 116045 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCT 115986 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| |||| || || ||||||||||| || || || ||||| Sbjct 115985 GACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 115926 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | | || | | ||||| || Sbjct 115925 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 115866 Query 27586 GTCCAAAAGGAATCCACT 27603 ||||||||||||||||| Sbjct 115865 ATCCAAAAGGAATCCACT 115848 >seq7 Length=810710 Score = 127 bits (140), Expect = 2e-24 Identities = 345/519 (66%), Gaps = 17/519 (3%) Strand=Plus/Plus Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290 |||||||| || || ||||||||||| | ||||| || | ||| || ||| || Sbjct 327553 TTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCA-CGAATCTCTTC 327611 Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350 | ||| ||||| || | || | || || | |||||| || |||||||| |||| Sbjct 327612 CTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAA 327671 Query 81351 ATACACGGCGATCG-ACC---CCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCG 81406 |||| |||| | ||| |||| | ||||| || | || ||||| ||||| Sbjct 327672 GTACAAAGCGAAAGCACCTGGCCTTTTGTTA-CCACCTTGATCCACATAACGAGCAGTGT 327730 Query 81407 CGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATAC 81466 ||| || ||||| | ||| ||||| | || | || |||||| ||||| | ||| Sbjct 327731 TGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATAT 327790 Query 81467 GCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAA 81525 || ||| | | || | ||| || || || ||| || ||||| | ||| ||| Sbjct 327791 ATGAACCCGTAGAACGAATGTTGTGTATGTGCAA-ACCAATACCACCAGCGGTCTTAGAA 327849 Query 81526 ATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCA 81585 ||| |||||| |||| || || ||||| ||||||||| || | |||||| | Sbjct 327850 ATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCG 327909 Query 81586 AGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTC 81645 | | |||||| ||||||||||||| | | || |||||||| || ||||| | Sbjct 327910 ATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAA 327969 Query 81646 GCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTT----GACGCGTGGAAT 81701 || |||||||| || | |||||||| | ||| || || | ||| || || Sbjct 327970 GCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCG----AT 328025 Query 81702 ATCGTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740 |||||||| |||||||| | ||| || | ||||| ||| Sbjct 328026 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCAT 328064 >seq6 Length=935435 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || || || || || || ||||||||||| | Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||| || ||||| || || || || ||||| || ||||| Sbjct 586206 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586147 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||||| || |||| | || ||| | || || || Sbjct 586146 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586087 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||| | |||||||| ||| | | || ||||| Sbjct 586086 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586040 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || || || || || || ||||||||||| | Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||| || ||||| || || || || ||||| || ||||| Sbjct 586434 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586375 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||||| || |||| | || ||| | || || || Sbjct 586374 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586315 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||| | |||||||| ||| | | || ||||| Sbjct 586314 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586268 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || || || || || || ||||||||||| | Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||| || ||||| || || || || ||||| || ||||| Sbjct 586662 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586603 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||||| || |||| | || ||| | || || || Sbjct 586602 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586543 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||| | |||||||| ||| | | || ||||| Sbjct 586542 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586496 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || || || || || || ||||||||||| | Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||| || ||||| || || || || ||||| || ||||| Sbjct 586890 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586831 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||||| || |||| | || ||| | || || || Sbjct 586830 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586771 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||| | |||||||| ||| | | || ||||| Sbjct 586770 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586724 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | || || || || || || || ||||||||||| | Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||| || ||||| || || || || ||||| || ||||| Sbjct 587118 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 587059 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||||| || |||| | || ||| | || || || Sbjct 587058 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586999 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||| | |||||||| ||| | | || ||||| Sbjct 586998 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586952 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || || || || || || ||||||||||| | Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||| || ||||| || || || || ||||| || ||||| Sbjct 585750 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 585691 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||||| || |||| | || ||| | || || || Sbjct 585690 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 585631 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||| | ||||| || ||| | | || ||||| Sbjct 585630 ATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585584 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || || || || || || ||||||||||| | Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||| || ||||| || || || || ||||| || ||||| Sbjct 585978 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 585919 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||||| || |||| | || ||| | || || || Sbjct 585918 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 585859 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||| | ||||| || ||| | | || ||||| Sbjct 585858 ATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585812 >seq2 Length=1385486 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| | || || ||||| || ||| | || ||||| || ||| | ||| Sbjct 975626 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 975567 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || || || || ||||| || | | Sbjct 975566 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 975507 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | || | | ||||| || |||||||| Sbjct 975506 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAAAG 975447 Query 27595 GAATCCACTCTTCA 27608 ||||||||||| || Sbjct 975446 GAATCCACTCTACA 975433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310000782720