Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 5e-25
seq8 116 3e-21
seq6 113 4e-20
>seq2
Length=1385486
Score = 129 bits (142), Expect = 5e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || ||| |||| || ||| | || ||| | ||||| ||| | || ||| | |||
Sbjct 975626 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 975567
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| ||| ||||||||||| ||||| || ||||| || ||||| | ||
Sbjct 975566 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 975507
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || |||||||||||| || || | ||||| |||||||| ||||||
Sbjct 975506 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAAAG 975447
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || |||| |||||| | | ||| | ||||| ||
Sbjct 975446 GAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGGTAT 975406
>seq8
Length=676247
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| ||||||| ||| ||||||| | ||||| ||| | ||
Sbjct 116045 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCT 115986
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || |||||||| || || || ||||| || |||
Sbjct 115985 GACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 115926
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || ||||||||||| || || | || || ||||||
Sbjct 115925 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 115866
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || || || || ||||| | | ||| | |||||
Sbjct 115865 ATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGG 115819
>seq6
Length=935435
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| | || || || | || || || || || || | ||
Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || |||||||| |||||||| || ||||| || |||
Sbjct 585750 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 585691
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || ||| | ||||| | || | ||||||||||||
Sbjct 585690 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 585631
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||| || || || ||| |||||||| | ||||| |||||
Sbjct 585630 ATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585584
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| | || || || | || || || || || || | ||
Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || |||||||| |||||||| || ||||| || |||
Sbjct 585978 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 585919
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || ||| | ||||| | || | ||||||||||||
Sbjct 585918 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 585859
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || || ||| |||||||| | ||||| ||||| ||
Sbjct 585858 ATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGGTAT 585809
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| | || || || | || || || || || || | ||
Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || |||||||| |||||||| || ||||| || |||
Sbjct 587118 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 587059
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || ||| | ||||| | || | ||||||||||||
Sbjct 587058 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586999
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || || ||| | |||||| | ||||| ||||| ||
Sbjct 586998 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGGTAT 586949
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| | || || || | || || || || || || | ||
Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || |||||||| |||||||| || ||||| || |||
Sbjct 586206 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586147
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || ||| | ||||| | || | ||||||||||||
Sbjct 586146 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586087
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || || ||| | |||||| | ||||| ||||| ||
Sbjct 586086 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGGTAT 586037
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| | || || || | || || || || || || | ||
Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || |||||||| |||||||| || ||||| || |||
Sbjct 586434 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586375
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || ||| | ||||| | || | ||||||||||||
Sbjct 586374 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586315
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || || ||| | |||||| | ||||| ||||| ||
Sbjct 586314 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGGTAT 586265
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| | || || || | || || || || || || | ||
Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || |||||||| |||||||| || ||||| || |||
Sbjct 586662 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586603
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || ||| | ||||| | || | ||||||||||||
Sbjct 586602 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586543
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || || ||| | |||||| | ||||| ||||| ||
Sbjct 586542 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGGTAT 586493
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| | || || || | || || || || || || | ||
Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || |||||||| |||||||| || ||||| || |||
Sbjct 586890 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586831
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || ||| | ||||| | || | ||||||||||||
Sbjct 586830 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586771
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || || ||| | |||||| | ||||| ||||| ||
Sbjct 586770 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGGTAT 586721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918095557120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |