Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq6 120 2e-22 >seq6 Length=935435 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| | Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | || | || || ||||||||| | || || || || Sbjct 586206 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 586148 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||||| ||||| | | | ||| || ||||||||| Sbjct 586147 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 586088 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || || ||| ||||||| || ||||| || || Sbjct 586087 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586040 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| | Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | || | || || ||||||||| | || || || || Sbjct 586434 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 586376 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||||| ||||| | | | ||| || ||||||||| Sbjct 586375 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 586316 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || || ||| ||||||| || ||||| || || Sbjct 586315 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586268 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| | Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | || | || || ||||||||| | || || || || Sbjct 586662 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 586604 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||||| ||||| | | | ||| || ||||||||| Sbjct 586603 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 586544 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || || ||| ||||||| || ||||| || || Sbjct 586543 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586496 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| | Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | || | || || ||||||||| | || || || || Sbjct 586890 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 586832 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||||| ||||| | | | ||| || ||||||||| Sbjct 586831 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 586772 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || || ||| ||||||| || ||||| || || Sbjct 586771 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586724 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | || || ||||| ||||| || || ||||| ||| | Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | || | || || ||||||||| | || || || || Sbjct 587118 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 587060 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||||| ||||| | | | ||| || ||||||||| Sbjct 587059 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 587000 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || || ||| ||||||| || ||||| || || Sbjct 586999 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586952 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| | Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | || | || || ||||||||| | || || || || Sbjct 585750 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 585692 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||||| ||||| | | | ||| || ||||||||| Sbjct 585691 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 585632 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || || ||| | ||||| || ||||| || || Sbjct 585631 CATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585584 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| | Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | || | || || ||||||||| | || || || || Sbjct 585978 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 585920 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||||| ||||| | | | ||| || ||||||||| Sbjct 585919 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 585860 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || || ||| | ||||| || ||||| || || Sbjct 585859 CATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009369308448