Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq6 120 2e-22
>seq6
Length=935435
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| |
Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | || | || | || || ||||||||| | || || || ||
Sbjct 586206 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 586148
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || || ||||| ||||| | | | ||| || |||||||||
Sbjct 586147 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 586088
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || || || || || ||| ||||||| || ||||| || ||
Sbjct 586087 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586040
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| |
Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | || | || | || || ||||||||| | || || || ||
Sbjct 586434 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 586376
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || || ||||| ||||| | | | ||| || |||||||||
Sbjct 586375 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 586316
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || || || || || ||| ||||||| || ||||| || ||
Sbjct 586315 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586268
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| |
Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | || | || | || || ||||||||| | || || || ||
Sbjct 586662 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 586604
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || || ||||| ||||| | | | ||| || |||||||||
Sbjct 586603 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 586544
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || || || || || ||| ||||||| || ||||| || ||
Sbjct 586543 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586496
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| |
Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | || | || | || || ||||||||| | || || || ||
Sbjct 586890 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 586832
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || || ||||| ||||| | | | ||| || |||||||||
Sbjct 586831 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 586772
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || || || || || ||| ||||||| || ||||| || ||
Sbjct 586771 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586724
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || | || || ||||| ||||| || || ||||| ||| |
Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | || | || | || || ||||||||| | || || || ||
Sbjct 587118 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 587060
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || || ||||| ||||| | | | ||| || |||||||||
Sbjct 587059 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 587000
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || || || || || ||| ||||||| || ||||| || ||
Sbjct 586999 CATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586952
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| |
Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | || | || | || || ||||||||| | || || || ||
Sbjct 585750 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 585692
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || || ||||| ||||| | | | ||| || |||||||||
Sbjct 585691 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 585632
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || || || || || ||| | ||||| || ||||| || ||
Sbjct 585631 CATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585584
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || ||||| ||||| || || ||||| ||| |
Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | || | || | || || ||||||||| | || || || ||
Sbjct 585978 GATACTATTGACAATGTCAAGAGCAAGA-TTCAAGATAAAGAAGGTATTCCACCTGACCA 585920
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || || ||||| ||||| | | | ||| || |||||||||
Sbjct 585919 ACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 585860
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || || || || || ||| | ||||| || ||||| || ||
Sbjct 585859 CATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009369308448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |