Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq8 170 5e-37
seq2 170 5e-37
seq6 143 6e-29
seq5 86.0 1e-11
>seq8
Length=676247
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| ||||| | ||| | ||||||||| ||||||| ||||| || | ||||||||| ||
Sbjct 115830 TCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 115889
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || || ||||| |||||
Sbjct 115890 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 115949
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| || | ||| || || || || ||
Sbjct 115950 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 116009
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || |||||||| || | ||| | |||||| ||
Sbjct 116010 AGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048
>seq2
Length=1385486
Score = 170 bits (188), Expect = 5e-37
Identities = 162/207 (78%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || | ||| ||||||||||| ||||||| ||||| |||| ||||||||| ||
Sbjct 975420 TCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 975479
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 975480 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 975539
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| |||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 975540 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 975599
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| || |||||||| || | |||
Sbjct 975600 GGTCTTACCAGTCAAAGTCTTGACGAA 975626
>seq6
Length=935435
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| || || || | ||| ||||| || |||| |||||||||| | |||
Sbjct 585589 ACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 585648
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| ||||||||||| ||||| || |||||||| | || ||||||||| || ||||||||
Sbjct 585649 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 585708
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || ||||| ||||| ||| ||| || || || || |||| || || || |
Sbjct 585709 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 585768
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || ||||| || | ||| | |||||
Sbjct 585769 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| || || || | ||| ||||| || |||| |||||||||| | |||
Sbjct 585817 ACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 585876
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| ||||||||||| ||||| || |||||||| | || ||||||||| || ||||||||
Sbjct 585877 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 585936
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || ||||| ||||| ||| ||| || || || || |||| || || || |
Sbjct 585937 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 585996
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || ||||| || | ||| | |||||
Sbjct 585997 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| || || || | ||| ||||| || |||| |||||||||| | |||
Sbjct 586045 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 586104
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| ||||||||||| ||||| || |||||||| | || ||||||||| || ||||||||
Sbjct 586105 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 586164
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || ||||| ||||| ||| ||| || || || || |||| || || || |
Sbjct 586165 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 586224
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || ||||| || | ||| | |||||
Sbjct 586225 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| || || || | ||| ||||| || |||| |||||||||| | |||
Sbjct 586273 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 586332
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| ||||||||||| ||||| || |||||||| | || ||||||||| || ||||||||
Sbjct 586333 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 586392
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || ||||| ||||| ||| ||| || || || || |||| || || || |
Sbjct 586393 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 586452
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || ||||| || | ||| | |||||
Sbjct 586453 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| || || || | ||| ||||| || |||| |||||||||| | |||
Sbjct 586501 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 586560
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| ||||||||||| ||||| || |||||||| | || ||||||||| || ||||||||
Sbjct 586561 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 586620
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || ||||| ||||| ||| ||| || || || || |||| || || || |
Sbjct 586621 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 586680
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || ||||| || | ||| | |||||
Sbjct 586681 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| || || || | ||| ||||| || |||| |||||||||| | |||
Sbjct 586729 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 586788
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| ||||||||||| ||||| || |||||||| | || ||||||||| || ||||||||
Sbjct 586789 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 586848
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || ||||| ||||| ||| ||| || || || || |||| || || || |
Sbjct 586849 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 586908
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || ||||| || | ||| | |||||
Sbjct 586909 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| || || || | ||| ||||| || |||| |||||||||| | |||
Sbjct 586957 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 587016
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| ||||||||||| ||||| || |||||||| | || ||||||||| || ||||||||
Sbjct 587017 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 587076
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || ||||| ||||| ||| ||| || || || || |||| || || || |
Sbjct 587077 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 587136
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| || || || || ||||| ||
Sbjct 587137 GGTGATGGTTTTACCAGTTAAAGTCTT 587163
>seq5
Length=957853
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || ||||| || || || |||||||| || ||||||||
Sbjct 417158 GAAAATTTGACCATCGGTAATGGAAATAACGTTAGTTGGAATATAAGCGGAGACATCACC 417099
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| || |||| ||| || || || || | || ||||||||
Sbjct 417098 ACCTTGGGTCTCGATAACTGGCAAAGCGGTCAAAGAACCACCACC 417054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530344358864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |