Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq8 170 5e-37 seq2 170 5e-37 seq6 143 6e-29 seq5 86.0 1e-11 >seq8 Length=676247 Score = 170 bits (188), Expect = 5e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | ||| | ||||||||| ||||||| ||||| || | ||||||||| || Sbjct 115830 TCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 115889 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| ||||| | || ||||||||| || || ||||| ||||| Sbjct 115890 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 115949 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||| || || ||||| || | ||| || || || || || Sbjct 115950 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 116009 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || |||||||| || | ||| | |||||| || Sbjct 116010 AGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048 >seq2 Length=1385486 Score = 170 bits (188), Expect = 5e-37 Identities = 162/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| ||||||||||| ||||||| ||||| |||| ||||||||| || Sbjct 975420 TCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 975479 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| ||||| ||||| | || ||||||||| || || ||||||||||| Sbjct 975480 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 975539 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| ||| || || ||||| || | ||| || || || ||||| Sbjct 975540 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 975599 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || |||||||| || | ||| Sbjct 975600 GGTCTTACCAGTCAAAGTCTTGACGAA 975626 >seq6 Length=935435 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| || || || | ||| ||||| || |||| |||||||||| | ||| Sbjct 585589 ACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 585648 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||||||||| ||||| || |||||||| | || ||||||||| || |||||||| Sbjct 585649 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 585708 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| ||||| ||| ||| || || || || |||| || || || | Sbjct 585709 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 585768 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || ||||| || | ||| | ||||| Sbjct 585769 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| || || || | ||| ||||| || |||| |||||||||| | ||| Sbjct 585817 ACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 585876 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||||||||| ||||| || |||||||| | || ||||||||| || |||||||| Sbjct 585877 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 585936 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| ||||| ||| ||| || || || || |||| || || || | Sbjct 585937 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 585996 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || ||||| || | ||| | ||||| Sbjct 585997 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| || || || | ||| ||||| || |||| |||||||||| | ||| Sbjct 586045 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 586104 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||||||||| ||||| || |||||||| | || ||||||||| || |||||||| Sbjct 586105 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 586164 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| ||||| ||| ||| || || || || |||| || || || | Sbjct 586165 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 586224 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || ||||| || | ||| | ||||| Sbjct 586225 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| || || || | ||| ||||| || |||| |||||||||| | ||| Sbjct 586273 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 586332 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||||||||| ||||| || |||||||| | || ||||||||| || |||||||| Sbjct 586333 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 586392 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| ||||| ||| ||| || || || || |||| || || || | Sbjct 586393 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 586452 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || ||||| || | ||| | ||||| Sbjct 586453 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| || || || | ||| ||||| || |||| |||||||||| | ||| Sbjct 586501 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 586560 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||||||||| ||||| || |||||||| | || ||||||||| || |||||||| Sbjct 586561 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 586620 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| ||||| ||| ||| || || || || |||| || || || | Sbjct 586621 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 586680 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || ||||| || | ||| | ||||| Sbjct 586681 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| || || || | ||| ||||| || |||| |||||||||| | ||| Sbjct 586729 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 586788 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||||||||| ||||| || |||||||| | || ||||||||| || |||||||| Sbjct 586789 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 586848 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| ||||| ||| ||| || || || || |||| || || || | Sbjct 586849 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 586908 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || ||||| || | ||| | ||||| Sbjct 586909 GGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| || || || | ||| ||||| || |||| |||||||||| | ||| Sbjct 586957 ACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 587016 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||||||||| ||||| || |||||||| | || ||||||||| || |||||||| Sbjct 587017 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACC 587076 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| ||||| ||| ||| || || || || |||| || || || | Sbjct 587077 TTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAG 587136 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || || || ||||| || Sbjct 587137 GGTGATGGTTTTACCAGTTAAAGTCTT 587163 >seq5 Length=957853 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| ||||| || ||||| || || || |||||||| || |||||||| Sbjct 417158 GAAAATTTGACCATCGGTAATGGAAATAACGTTAGTTGGAATATAAGCGGAGACATCACC 417099 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||| || |||| ||| || || || || | || |||||||| Sbjct 417098 ACCTTGGGTCTCGATAACTGGCAAAGCGGTCAAAGAACCACCACC 417054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530344358864