Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4 259 4e-64 >seq4 Length=1065440 Score = 259 bits (286), Expect = 4e-64 Identities = 599/896 (67%), Gaps = 15/896 (2%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| || ||||| || || |||| ||||||||| ||||| || || || | | | Sbjct 810911 ACACCAGCCTTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGC 810970 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 || || || ||||| |||||||| || ||||| ||||| || ||| | | | | Sbjct 810971 GAGATGTTCTCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCTTGTTCCCGAAA 811030 Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427 || || || | || ||||| || || || | |||||| |||| || ||| ||| || Sbjct 811031 GCGACCAGTAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATA 811090 Query 4428 CCAATTAATCTCACAGGTAGCGCGTATGTCAAAAAC-TCTTGTTCTATAGTTACGGCTTC 4486 || | ||| || ||||| || | | || || |||| ||| || |||||||| Sbjct 811091 CCCAATAAAGAAACGGGTAGAGCATCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTC 811149 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAAT 4544 || || || ||||| | || ||| || ||||| || | |||| | | Sbjct 811150 AGTAATAAT--CTTTTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGT 811207 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 | ||| |||||||| ||| |||||||| ||||||| |||| |||||||||||||||| Sbjct 811208 AGACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTT 811267 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 | || ||||||| |||| |||| || | ||| || ||||| ||||| || || |||||| Sbjct 811268 AGACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAG 811327 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT---TG 4721 || || ||||| | ||| || || || || |||| ||| || | | || || Sbjct 811328 AAAATACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGA---AGATAGATTCACTG 811384 Query 4722 TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATA 4781 || | ||||||| | | ||||| | || || | |||| ||||| | | || Sbjct 811385 TCCTGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATC 811444 Query 4782 GCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTA 4841 || || ||||| | |||| ||| || | |||||||| || |||| ||| | Sbjct 811445 GCATTGAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAA 811504 Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 || | || || || || ||||| || || || || || || || ||| |||||||| Sbjct 811505 TAGGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCT 811564 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 | | ||| ||||| || || | || ||||| || || ||||||||||| ||| | Sbjct 811565 GGAATTTGCACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAG 811624 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTT 5018 || ||||| || ||||| ||| | || || || | |||| ||| | || | || Sbjct 811625 GCAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTA 811684 Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCC 5078 ||||| | | | ||| || | | ||||| ||||| | ||||| ||||| || || Sbjct 811685 TTCCAATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCT 811744 Query 5079 GCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 ||| | || ||| |||||| ||| | || | || || | || |||||||| Sbjct 811745 GCTCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCT 811800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049308538648