Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7 372 4e-98 seq4 282 6e-71 seq1 138 2e-27 >seq7 Length=810710 Score = 372 bits (412), Expect = 4e-98 Identities = 1338/2077 (64%), Gaps = 39/2077 (2%) Strand=Plus/Plus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| || | || || ||||| | || ||| |||| || ||| | || |||||||||| Sbjct 326294 TCTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATAC 326353 Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890 |||| || | |||| |||| |||||||||||||| || |||| ||| | | | Sbjct 326354 CAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTG 326413 Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950 || | || ||||| |||| || || ||||||||| || | | | |||||| | Sbjct 326414 GAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTG 326473 Query 76951 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010 |||| | || || || ||||||| |||||||||| ||| ||| | | | || | | Sbjct 326474 CCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTT 326533 Query 77011 CATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATT-CTTT 77066 | | |||| || | |||||| ||||| ||| ||| | || || || || ||| Sbjct 326534 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGAT-GTGTTGCTTC 326592 Query 77067 ATATCATCATTCCACAATTTCCTC--TCTGTTAAAACTCTAAGGAGATGAGGATTAACTA 77124 ||| ||||| ||| | | ||| || ||| | | || | | ||| || || | Sbjct 326593 ATACTATCATCCCAGA--TACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAA 326650 Query 77125 TTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAG 77184 |||| ||||| || || || || | ||||| ||| ||||| || ||||| || | | Sbjct 326651 TTTGGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAAC 326710 Query 77185 ATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAAC 77244 | || |||| || | ||| || | ||| || ||||||||||| || |||| | ||| Sbjct 326711 ACTCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAG 326770 Query 77245 TATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 77304 ||||| | ||||| | |||| | | || | | | ||||||||| ||||| | Sbjct 326771 AGTTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCG 326830 Query 77305 AAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT-GATCCATTA 77363 | ||| | ||| |||||||| || | ||| || | | || | || || | | Sbjct 326831 ATGGTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAG-AGATTGGAGAACCTTCA 326889 Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 || || |||||||| || | | || | ||||| |||||||| | ||| Sbjct 326890 TAAGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGG 326949 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAA 77483 || || |||||||| || | | || ||||| | ||||| | ||||| ||| | Sbjct 326950 TAGATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACA 327009 Query 77484 TGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTC 77543 | || | ||||| | || || || || | || || | | | |||||||| | |||| Sbjct 327010 CGCAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTC 327069 Query 77544 TTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGA 77603 |||| || || ||||||| |||| || || || || || || | || || | Sbjct 327070 ATATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAG 327129 Query 77604 TTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--------TCTT- 77654 || | | | || || | | | | | || ||||||| | |||| Sbjct 327130 TTACGAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTA 327189 Query 77655 CCATCTATAACAA-------ACATGTTC--AAAGCTATAGATGCTAGATTACAAACTGCT 77705 ||||| | ||| ||| | | ||||| || || || | |||||||| || Sbjct 327190 CCATCATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCA 327249 Query 77706 ACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTG 77765 ||||| || | || | | || || ||| | ||| |||| || || Sbjct 327250 GTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTA 327309 Query 77766 CCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTC 77825 |||| || | ||||||||||||| |||| || | || || ||||| || || ||||| Sbjct 327310 CCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTA 327369 Query 77826 CCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGAT 77885 || || || | || ||||| | |||| | ||| | | |||||| || | | Sbjct 327370 CCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTC--T 327427 Query 77886 TTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCG--TTCAAATTCATCTCCCCAAA 77943 || || | | | || | | || ||| | |||||||||||| || ||| Sbjct 327428 TTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAA 327487 Query 77944 CATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAA 78003 ||||| ||| || || |||| |||| | | ||| | ||| ||||||| || | || Sbjct 327488 CATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAA 327547 Query 78004 CTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTT 78063 | |||||||| || | ||| || ||||| || || || | ||||| | | | | Sbjct 327548 CACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCT 327607 Query 78064 CTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTT 78123 |||| || || ||||| | ||| | || || | || || | |||||||||| Sbjct 327608 CTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTT 327667 Query 78124 CTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGG 78183 | | || | || | | | || || | ||| ||||| || ||||| | ||| | || | Sbjct 327668 CCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAG 327727 Query 78184 TGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAA 78243 |||| || | || | | ||| || || | ||||| || || || || || || | || Sbjct 327728 TGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAA 327787 Query 78244 TATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAG 78303 |||| || | | ||||| || ||| | || || || || || |||||| Sbjct 327788 TATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAG 327847 Query 78304 ATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | || | ||| || ||||| |||||||| |||||||| || ||||||| ||||| Sbjct 327848 AAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGG 327907 Query 78364 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAG 78423 | || ||||| |||||| ||| | | ||| || ||||| || | || |||| Sbjct 327908 CGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAG 327967 Query 78424 ATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGT 78483 | ||||| | || || | || | ||||| || || |||||||| || || |||| Sbjct 327968 AAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGT 328027 Query 78484 CCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCT 78543 | |||||| || || || || | ||| | |||||| ||||| | |||| | | || Sbjct 328028 CGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGC-GACT 328086 Query 78544 T-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA- 78601 | | |||||| ||| || || || |||| |||||| || ||||||||||| | Sbjct 328087 TCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAG 328146 Query 78602 -TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAA 78660 ||||| ||||| || |||| |||| |||| || | | ||| || | |||| | || | Sbjct 328147 TTGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGA 328204 Query 78661 TATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGT 78720 | ||||| || || || |||||||| | || || || || || || ||||||| Sbjct 328205 TGTCCATAACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGT 328264 Query 78721 TAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATA 78780 | || || || || || | | ||| |||| | || | |||||| | |||||| | Sbjct 328265 TGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGA 328324 Query 78781 CAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 ||||||||| || || | | |||||||||||||||| Sbjct 328325 TAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATG 328361 >seq4 Length=1065440 Score = 282 bits (312), Expect = 6e-71 Identities = 592/872 (68%), Gaps = 28/872 (3%) Strand=Plus/Plus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930 || ||||||||||| || || || ||| || || || ||||| ||||||||||| ||| Sbjct 810941 TTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAATGGGTTA 811000 Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 47990 | || ||| ||| || || || | | |||||||| || ||||| || Sbjct 811001 GTCACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGACGAACTCA 811060 Query 47991 ATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT- 48049 | || ||||||| || ||||| || | | ||| |||||||| || | Sbjct 811061 ACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGCATCGATG 811120 Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATCC-----ACTATTATCGATGTT--ACCGTTT 48102 ||| | ||||| |||||| ||| || || | | || ||||| | | | | Sbjct 811121 AAGTACCTCTT-TTCGATCTCGACGGCTTCAGTAATAATCTTTTCGATAATGGAAGGAT- 811178 Query 48103 CCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGAC 48162 || ||| || | |||||| ||| | || |||||||||||| ||| | || Sbjct 811179 -CTGGCTT-----ATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAAC 811232 Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| | || |||||||||||||| || ||||| |||||||| || || | Sbjct 811233 CTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCT 811292 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | | ||| || || || || || || || |||||||| || ||||| | ||| || || | Sbjct 811293 TCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATGGCAGCGAAAG 811352 Query 48283 CGGTAAGTCTCTCTCCGTAACTGGCTTC---GTTGTGTATCCACCGTTGTGCCCAATCAG 48339 | | ||||||| || | | | ||| || || ||||| | ||||| || | Sbjct 811353 CAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCATTCGG 811412 Query 48340 CCTTCTTCTTTACAC-AAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 ||||| |||||| | ||| || |||| || ||||| || | || | |||| || Sbjct 811413 CCTTC-TCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAAGAAATCGCTTTCCTTT 811471 Query 48399 CTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATT 48458 ||| || | |||||||| ||||| || ||| | || |||||||| ||||| || Sbjct 811472 GGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATC 811531 Query 48459 GCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTAC--AAAATC 48516 || || || || || |||||| | ||||||| || || || || | || ||| || Sbjct 811532 ATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAATTC 811591 Query 48517 GTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTT 48576 ||| | ||||||||||||||||| |||||| |||||||| || || || ||| | Sbjct 811592 --TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGG 811649 Query 48577 TAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATA 48633 || ||| || ||||||| | ||| | |||||||| |||| ||||| || || | Sbjct 811650 AGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATGAATATCCTTCGACA 811709 Query 48634 TATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATAT 48693 ||| | ||||| || ||||| || || ||||||||| | |||||| | ||| || | Sbjct 811710 GATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCT 811769 Query 48694 CACTGTATTGGATTGGGAAAATAACAAATCTA 48725 || ||||| ||||||||| | |||||||||| Sbjct 811770 CATGGTATTTGATTGGGAATAGAACAAATCTA 811801 >seq1 Length=1424806 Score = 138 bits (152), Expect = 2e-27 Identities = 218/310 (70%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 ||||||| || ||||| |||||||| | || | ||||| | ||||||| Sbjct 989082 TTTCATAATGCTCATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGG 989141 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 |||| ||| | | ||| |||| || |||| || || || |||| || || | Sbjct 989142 CCTCATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGT 989201 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 |||||||||| || |||| ||| ||||||| || ||| |||||| || || |||| Sbjct 989202 CAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCT 989261 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 || ||| | ||||| || | || || | ||||||||| || ||||||| ||| |||| Sbjct 989262 TTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATA-TGCAATAA 989320 Query 78142 -CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTC 78200 |||| || | || || || |||||||||| |||||| || |||||||| |||| | Sbjct 989321 GCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGA 989380 Query 78201 AACATTGGAA 78210 | |||||||| Sbjct 989381 AGCATTGGAA 989390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668313731840