Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq7 349 5e-91 seq4 297 3e-75 seq1 145 1e-29 >seq7 Length=810710 Score = 349 bits (386), Expect = 5e-91 Identities = 1333/2079 (64%), Gaps = 43/2079 (2%) Strand=Plus/Plus Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425 |||| || | ||||| ||||| | || || || | || ||| | || |||||||||| Sbjct 326294 TCTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATAC 326353 Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485 |||| || | |||| |||| |||||||||||||| || || | ||| | | | Sbjct 326354 CAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTG 326413 Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545 || | || ||||| |||| || || ||||||||| || | | | |||||| | Sbjct 326414 GAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTG 326473 Query 75546 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 75605 |||| | || || || ||||||| |||||||||| ||| ||| | | | || | | Sbjct 326474 CCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTT 326533 Query 75606 CATCTGGAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATT-CTTG 75661 | | |||| ||| | |||||| ||||| || ||||| || || || || ||| Sbjct 326534 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGAT-GTGTTGCTTC 326592 Query 75662 ATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATT 75721 || ||||| ||| | | ||| ||| | | || | | ||| || |||||| Sbjct 326593 ATACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATT 326652 Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 || ||||| || || || || | |||| ||| ||||| || ||||| || | | | Sbjct 326653 TGGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACAC 326712 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 || |||| || | ||| || | ||| || ||||| ||||| || |||| | ||| Sbjct 326713 TCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAG 326772 Query 75842 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAT 75901 ||||| | ||||| | |||| | | || | | | ||||||||| ||||| ||| Sbjct 326773 TTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGAT 326832 Query 75902 GGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATAT-GATCCATTATA 75960 ||| | ||| |||||||| || | ||| || ||| || | || || | ||| Sbjct 326833 GGTTTGGTGTTCCACAGATCGTACTGCAAAATACC-TTGAGAGATTGGAGAACCTTCATA 326891 Query 75961 TGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATA 76020 || ||||| || ||||| | || | || || || || || | | ||| || Sbjct 326892 AGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTA 326951 Query 76021 AATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATG 76080 || |||||||| || | | || ||||| | ||||| || ||||| ||| | | Sbjct 326952 GATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACG 327011 Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 || | ||||| | || || | || | || || | | | |||||||| | |||| | Sbjct 327012 CAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCAT 327071 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 ||| || || |||||| |||| ||||| || || ||| || | || || | || Sbjct 327072 ATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTT 327131 Query 76201 TC---TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT---------TT 76248 | ||| ||| || | | | | | ||| ||||||| | || Sbjct 327132 ACGAGTGATAACC---TTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTT 327188 Query 76249 TCCATCTATCACAAACAT-ATTA---------AGAGCTATAGATGCTAGATTACAAACGG 76298 ||||| |||| ||| | | || | ||| || || || | |||||||||| Sbjct 327189 ACCATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGG 327247 Query 76299 CTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAG 76358 | ||||| || | || | | || || || | ||| | || || | Sbjct 327248 CAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGG 327307 Query 76359 TTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAG 76418 | || | || | ||||||||||||| | ||||| | || || ||||| | || |||| Sbjct 327308 TACCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAG 327367 Query 76419 TTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAG 76478 | ||||| || | || ||||| | |||| | ||| | | |||||| || | Sbjct 327368 TACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTC- 327426 Query 76479 ATTTGTATCGCTTCTCTCTTTCA--TATTGTGTATATAACCGTTCAAATTCATCTCCCCA 76536 ||| || | | | || | || || ||| || |||||||||||| || | Sbjct 327427 -TTTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATA 327485 Query 76537 AACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT 76596 ||||||| |||||| ||| |||| | ||| | | ||| | ||| ||||||| || | Sbjct 327486 AACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTG 327545 Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656 ||| |||||||| || | ||| || ||||| || || || | ||||| | | | Sbjct 327546 AACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAAT 327605 Query 76657 TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716 ||||| || || ||||| | ||||| ||| || | || || | |||||||| Sbjct 327606 CTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGG 327665 Query 76717 TTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGC 76776 ||| | || | || | | |||| || | ||| ||||| || ||||| | ||| | || Sbjct 327666 TTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGC 327725 Query 76777 AGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGA 76836 |||||| || | || | | ||| || || | ||||| || ||||| || || || | Sbjct 327726 AGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGC 327785 Query 76837 AATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTT 76896 |||||| || | |||||| || || | || || || || || | || Sbjct 327786 AATATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTT 327845 Query 76897 AGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956 ||| || | |||||| ||||| || || || || ||||| || |||||| |||| Sbjct 327846 AGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCAT 327905 Query 76957 GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGG 77016 | | || ||||| |||||| ||| | | ||| || ||||| || | || || Sbjct 327906 GGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGG 327965 Query 77017 AGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTAT 77076 ||| |||||| |||| || | || | ||||| || || |||||| | | || || Sbjct 327966 AGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGAT 328025 Query 77077 ATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGT 77136 || |||||| || ||||| || | ||| | |||||| ||||| ||||| | | Sbjct 328026 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGC-GA 328084 Query 77137 CTT-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 77195 ||| | |||||| ||| || || || |||| |||||| || ||||||||||| Sbjct 328085 CTTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAA 328144 Query 77196 A--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAAC 77253 | ||||| ||||| || |||| |||| | || || | | ||||||| |||| | || Sbjct 328145 AGTTGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGAC 328202 Query 77254 AATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATA 77313 || ||||| || || || || ||||| | | || || || || || ||||| Sbjct 328203 GATGTCCATAACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATA 328262 Query 77314 GTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGA 77373 ||| || || || || || | ||| |||| | || | |||||| | ||| || Sbjct 328263 GTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGA 328322 Query 77374 TACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 | ||||||||||| || | | | ||||| |||||||| Sbjct 328323 GATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATG 328361 >seq4 Length=1065440 Score = 297 bits (328), Expect = 3e-75 Identities = 605/888 (68%), Gaps = 18/888 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| ||| || | || ||||||||||| || || || ||| || || || Sbjct 810920 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 810979 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| |||||||| || ||||| || || ||| ||| || || || | | Sbjct 810980 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGT 811039 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 |||||||| || ||||| || | ||| ||||||| || ||||| || | | Sbjct 811040 AGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAA 811099 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || |||||||| || | ||| | ||||| ||| || ||| || || | || || Sbjct 811100 GAAACGGGTAGAGCATCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTCAGTAATAAT 811158 Query 46578 CGAT--GTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCA 46635 | | | || || | ||| || | ||||||| ||| | || ||||||| Sbjct 811159 CTTTTCGATAATGGAAGG--ATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCA 811216 Query 46636 AAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGC 46695 ||||| ||| | ||||||||||| | || |||||||||||||| || || || ||| Sbjct 811217 AAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGC 811276 Query 46696 ATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCT 46755 ||||| || ||| || | ||| || ||||| || || || || |||||||| || ||| Sbjct 811277 ATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCT 811336 Query 46756 TCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA---TTATGAATCCAC 46812 || | || ||||| || || | ||||||| || | | | ||| | |||||||| Sbjct 811337 TCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCAT 811396 Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACAC-AAGGCATTGTTTCTATAGCATTAAAGAG 46871 || |||||| || ||| || |||||| | ||| || |||| || ||||| || | Sbjct 811397 CTGATAGCCCATTCGGCC-TTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAA 811455 Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGA 46931 || | |||| | ||| || | ||| ||||| ||||| || ||| | ||||| Sbjct 811456 GAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGA 811515 Query 46932 ATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTAC 46991 ||||||||||| || || || || || || |||||| | ||||| | ||| || || Sbjct 811516 GTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCAC 811575 Query 46992 CTCTGTAC--AAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAA 47049 |||| || ||| || ||| ||||||||||| ||||| |||||| |||||||| Sbjct 811576 TTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAG 811633 Query 47050 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTCA 47106 || ||||| ||| | || ||| || |||| | | ||| | |||||||| ||| Sbjct 811634 AAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCA 811693 Query 47107 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTA 47166 | ||||| || || | ||| | ||||| || |||||||| || ||||||||| | ||| Sbjct 811694 TGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTA 811753 Query 47167 TACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTA 47214 ||| | ||| || ||| | |||| ||| || || | |||||||||| Sbjct 811754 TACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801 >seq1 Length=1424806 Score = 145 bits (160), Expect = 1e-29 Identities = 360/540 (67%), Gaps = 10/540 (2%) Strand=Plus/Plus Query 76497 TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556 ||||||| || |||||| |||||||| | || | ||||| | ||||| Sbjct 989082 TTTCATAATGCTCATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGG 989141 Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616 |||| |||| | ||| |||| || |||| || ||||| |||| || || | Sbjct 989142 CCTCATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGT 989201 Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676 |||||||||| || |||| ||| ||||||| || ||| |||||| || || |||| Sbjct 989202 CAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCT 989261 Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736 || ||| | ||| || || | || || | ||||||||| || |||||||| || |||| Sbjct 989262 TTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAA 989320 Query 76737 -CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTC 76795 | || || | || || || |||||||||| |||||| ||||||||||| |||| | Sbjct 989321 GCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGA 989380 Query 76796 AACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACA--TG 76853 | |||||||| | |||| | || |||||| | || | |||||| || || || Sbjct 989381 AGCATTGGAACCAAGCCGCTCGACACACCATTGCTACCTG--ATATAAGCGCCCCATTTG 989438 Query 76854 CACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913 | ||| || || | ||||| || || |||| ||| || || | | | | Sbjct 989439 ATCTAATGTTGGAAACATGAAGGCCAATACCACCTGAAGCTTTGGAAATCATGG--CTGT 989496 Query 76914 GTTTCAATGTGTCAT--AGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACA 76971 || | ||||| | | || || |||||| || || ||||| | ||||||||| Sbjct 989497 CTTGTGAAGTGTCTTGAAAATACCATCTATAGAGTCCTCTATCATTCCCACAAGAAAACA 989556 Query 76972 GCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAA 77031 |||| | || | || || |||||||| || || || || || |||||| |||| Sbjct 989557 TGACGACAAGTACTGGTTCACTGTACCTGCATTGAATAAAGTCGGTGAGGCATGAATGAA 989616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933900945920