Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 125 2e-23 seq2 107 4e-18 seq8 102 2e-16 >seq6 Length=935435 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | |||||| || || |||||||||||||||| || |||||| ||||||||| Sbjct 585602 ACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 585661 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || |||||||| | || || ||||| | | || ||||| || |||||| Sbjct 585662 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 585721 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| | || | | || || ||| || || || || || ||||| Sbjct 585722 ATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTA 585781 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||||| |||||| Sbjct 585782 CCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | |||||| || || |||||||||||||||| || |||||| ||||||||| Sbjct 585830 ACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 585889 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || |||||||| | || || ||||| | | || ||||| || |||||| Sbjct 585890 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 585949 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| | || | | || || ||| || || || || || ||||| Sbjct 585950 ATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTA 586009 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||||| |||||| Sbjct 586010 CCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | |||||| || || |||||||||||||||| || |||||| ||||||||| Sbjct 586058 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 586117 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || |||||||| | || || ||||| | | || ||||| || |||||| Sbjct 586118 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 586177 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| | || | | || || ||| || || || || || ||||| Sbjct 586178 ATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTA 586237 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||||| |||||| Sbjct 586238 CCAGTTAAAGTCTTGACGAAGATCTGCAT 586266 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | |||||| || || |||||||||||||||| || |||||| ||||||||| Sbjct 586286 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 586345 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || |||||||| | || || ||||| | | || ||||| || |||||| Sbjct 586346 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 586405 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| | || | | || || ||| || || || || || ||||| Sbjct 586406 ATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTA 586465 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||||| |||||| Sbjct 586466 CCAGTTAAAGTCTTGACGAAGATCTGCAT 586494 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | |||||| || || |||||||||||||||| || |||||| ||||||||| Sbjct 586514 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 586573 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || |||||||| | || || ||||| | | || ||||| || |||||| Sbjct 586574 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 586633 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| | || | | || || ||| || || || || || ||||| Sbjct 586634 ATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTA 586693 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||||| |||||| Sbjct 586694 CCAGTTAAAGTCTTGACGAAGATCTGCAT 586722 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | |||||| || || |||||||||||||||| || |||||| ||||||||| Sbjct 586742 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 586801 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || |||||||| | || || ||||| | | || ||||| || |||||| Sbjct 586802 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 586861 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| | || | | || || ||| || || || || || ||||| Sbjct 586862 ATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTA 586921 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||||| |||||| Sbjct 586922 CCAGTTAAAGTCTTGACGAAGATCTGCAT 586950 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | |||||| || || |||||||||||||||| || |||||| ||||||||| Sbjct 586970 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 587029 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || |||||||| | || || ||||| | | || ||||| || |||||| Sbjct 587030 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 587089 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| | || | | || || ||| || || || || || ||||| Sbjct 587090 ATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTA 587149 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCTTACT 152116 || || | |||||| || || | |||||| | | |||||| Sbjct 587150 CCAGTTAAAGTCTTGACAAAAATCTGCATCCTGCTCTTACT 587190 >seq2 Length=1385486 Score = 107 bits (118), Expect = 4e-18 Identities = 144/199 (72%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || || |||||||||||||| |||| |||||||| || ||||| | Sbjct 975429 CAAG-TGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCA 975487 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | ||| |||||||| ||||||| Sbjct 975488 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAA 975547 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| |||||| | || | |||| ||| || ||||| | ||| || || || | Sbjct 975548 TCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTAC 975607 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | || | |||||| ||||| Sbjct 975608 CAGTCAAAGTCTTGACGAA 975626 >seq8 Length=676247 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | || | ||| || || |||||||||||||| || | |||||||| || Sbjct 115830 TCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 115889 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || ||||| | || || ||||| | | ||| || ||||| Sbjct 115890 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 115949 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || |||||| | || | |||| ||| || ||||| | ||||| Sbjct 115950 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 116009 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||| || || || | |||||| ||||| | ||||| || Sbjct 116010 AGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819972133576