Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq8 178 3e-39 seq2 161 2e-34 seq6 150 4e-31 >seq8 Length=676247 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || |||| || || ||| ||| ||||||||||||||||||| Sbjct 115818 ACCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 115877 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | ||||| || | ||| || || ||||||||||| | |||||||||| || Sbjct 115878 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 115937 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||||||||| | || || | || |||||||| |||| |||||| Sbjct 115938 GATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGAC 115997 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| | || || |||||||| ||||||||||| ||||| || ||||| || Sbjct 115998 TTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048 >seq2 Length=1385486 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || |||| |||| ||| ||| ||||||||||||||||| | Sbjct 975408 ACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGA 975467 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | || || || | ||| || || ||||||||||| | |||||||||| || Sbjct 975468 CAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 975527 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||||||||| ||||||| || || | || |||||||| |||| ||| || Sbjct 975528 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 975587 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| | |||||| |||||||| ||||||||||| ||||| Sbjct 975588 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 975626 >seq6 Length=935435 Score = 150 bits (166), Expect = 4e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||||| | | |||||||| || || ||| || ||||||||||| || | Sbjct 585582 AACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGG 585641 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 || || | ||||| |||||||| || || || |||||||| | |||||||||| | Sbjct 585642 ATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTG 585701 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||||| || || ||||| ||| ||||| || || | || ||||| || || | || Sbjct 585702 GAATACCTTCTTTATCTTGAATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 585760 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| || ||||| || |||||||| ||||| |||||||| Sbjct 585761 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | | |||||||| || || ||| || ||||||||||| || | Sbjct 585811 ACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 585870 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||||||| || || || |||||||| | |||||||||| || Sbjct 585871 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 585930 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| || || ||||| ||| ||||| || || | || ||||| || || | || | Sbjct 585931 AATACCTTCTTTATCTTGAATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAA 585989 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| || ||||| || |||||||| ||||| |||||||| Sbjct 585990 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Score = 145 bits (160), Expect = 2e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | | || ||||| || || ||| || ||||||||||| || | Sbjct 586039 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 586098 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||||||| || || || |||||||| | |||||||||| || Sbjct 586099 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 586158 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| || || ||||| ||| ||||| || || | || ||||| || || | || | Sbjct 586159 AATACCTTCTTTATCTTGAATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAA 586217 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| || ||||| || |||||||| ||||| |||||||| Sbjct 586218 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266 Score = 145 bits (160), Expect = 2e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | | || ||||| || || ||| || ||||||||||| || | Sbjct 586267 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 586326 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||||||| || || || |||||||| | |||||||||| || Sbjct 586327 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 586386 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| || || ||||| ||| ||||| || || | || ||||| || || | || | Sbjct 586387 AATACCTTCTTTATCTTGAATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAA 586445 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| || ||||| || |||||||| ||||| |||||||| Sbjct 586446 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494 Score = 145 bits (160), Expect = 2e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | | || ||||| || || ||| || ||||||||||| || | Sbjct 586495 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 586554 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||||||| || || || |||||||| | |||||||||| || Sbjct 586555 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 586614 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| || || ||||| ||| ||||| || || | || ||||| || || | || | Sbjct 586615 AATACCTTCTTTATCTTGAATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAA 586673 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| || ||||| || |||||||| ||||| |||||||| Sbjct 586674 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722 Score = 145 bits (160), Expect = 2e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | | || ||||| || || ||| || ||||||||||| || | Sbjct 586723 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 586782 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||||||| || || || |||||||| | |||||||||| || Sbjct 586783 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 586842 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| || || ||||| ||| ||||| || || | || ||||| || || | || | Sbjct 586843 AATACCTTCTTTATCTTGAATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAA 586901 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| || ||||| || |||||||| ||||| |||||||| Sbjct 586902 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950 Score = 140 bits (154), Expect = 7e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | | || ||||| || || ||| || ||||||||||| || | Sbjct 586951 ACCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 587010 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||||||| || || || |||||||| | |||||||||| || Sbjct 587011 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 587070 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| || || ||||| ||| ||||| || || | || ||||| || || | || | Sbjct 587071 AATACCTTCTTTATCTTGAATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAA 587129 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| || ||||| || |||||||| || || |||||||| Sbjct 587130 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738448964624