Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq6 159 8e-34
seq8 109 1e-18
>seq6
Length=935435
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || || ||||| |||||||| ||||| || ||| ||
Sbjct 585807 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 585748
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| || |||||||| || || || ||||| |||
Sbjct 585747 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 585688
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||||||||| ||||| ||||||| ||| ||
Sbjct 585687 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 585628
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || ||||| || ||||||| |||||||||
Sbjct 585627 CAGAAGGAATCTACTTTGCATCTGGTTTTGAGA 585595
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || || ||||| |||||||| ||||| || ||| ||
Sbjct 586035 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 585976
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| || |||||||| || || || ||||| |||
Sbjct 585975 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 585916
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||||||||| ||||| ||||||| ||| ||
Sbjct 585915 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 585856
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || ||||| || ||||||| |||||||||
Sbjct 585855 CAGAAGGAATCTACTTTGCATCTGGTTTTGAGA 585823
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || || ||||| |||||||| ||||| || ||| ||
Sbjct 586263 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 586204
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| || |||||||| || || || ||||| |||
Sbjct 586203 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 586144
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||||||||| ||||| ||||||| ||| ||
Sbjct 586143 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586084
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || ||||| || ||||||| |||||||||
Sbjct 586083 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586051
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || || ||||| |||||||| ||||| || ||| ||
Sbjct 586491 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 586432
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| || |||||||| || || || ||||| |||
Sbjct 586431 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 586372
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||||||||| ||||| ||||||| ||| ||
Sbjct 586371 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586312
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || ||||| || ||||||| |||||||||
Sbjct 586311 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586279
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || || ||||| |||||||| ||||| || ||| ||
Sbjct 586719 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 586660
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| || |||||||| || || || ||||| |||
Sbjct 586659 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 586600
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||||||||| ||||| ||||||| ||| ||
Sbjct 586599 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586540
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || ||||| || ||||||| |||||||||
Sbjct 586539 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586507
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || || ||||| |||||||| ||||| || ||| ||
Sbjct 586947 CAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 586888
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| || |||||||| || || || ||||| |||
Sbjct 586887 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 586828
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||||||||| ||||| ||||||| ||| ||
Sbjct 586827 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586768
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || ||||| || ||||||| |||||||||
Sbjct 586767 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586735
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || ||| | || || ||||| |||||||| ||||| || ||| ||
Sbjct 587175 CAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCTGAT 587116
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| || |||||||| || || || ||||| |||
Sbjct 587115 ACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAACAA 587056
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||||||||| ||||| ||||||| ||| ||
Sbjct 587055 AGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAACATC 586996
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || ||||| || ||||||| |||||||||
Sbjct 586995 CAGAAGGAATCTACTTTGCATCTAGTTTTGAGA 586963
>seq8
Length=676247
Score = 109 bits (120), Expect = 1e-18
Identities = 148/205 (72%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||| | || || ||| || |||
Sbjct 116042 CAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCTGAC 115983
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| || || ||||| || ||||| |||
Sbjct 115982 ACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAACAA 115923
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | |||||||| || ||| | | || || ||| ||
Sbjct 115922 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATC 115863
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| || |||| ||||
Sbjct 115862 CAAAAGGAATCCACTTTGCA-CTTG 115839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730336322864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |