Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq41 107 4e-18 >seq41 Length=1599359 Score = 107 bits (118), Expect = 4e-18 Identities = 237/347 (68%), Gaps = 10/347 (3%) Strand=Plus/Minus Query 282416 CAAGAAACCTGGAATTTCTAGGAGACTGGGAAAACAGCTATGGAAAAAGTTCATGACAAG 282475 ||| ||||||||||| ||||| | | |||||| | |||| ||||| || |||| | Sbjct 335980 CAAAAAACCTGGAATATCTAGCAAGCCAGGAAAAGAACTATCCAAAAAATTTATGATTAA 335921 Query 282476 ACCA--GAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCATCACATGACCGTAT 282533 ||| || |||||| ||| ||| ||| || ||||||||||||| |||||| ||| Sbjct 335920 ACCTTTGATATGTGA--TCCATCATGATCTTGATCTGTCATGATCATCAAATGACCATAT 335863 Query 282534 CTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGT-TTGAAGGCCCAAAATTTGTTTGAG 282592 || | || || || |||| ||| |||| || | |||||| |||| ||||| ||||| Sbjct 335862 CTTAAAGTAGTTGTATCTTCATAC-CTTTTGCGATGTTGAAGACCCATAATTTTTTTGAT 335804 Query 282593 CGCGGTGATTTCTTCGTTCTTTGTGATACTTG--CCACAGATGCATCGCGAACGTTCAGC 282650 || |||||| |||| ||| || | ||| | ||| || || | || |||| Sbjct 335803 GGCCTGAATTTCTGCGTT-TTTCAGA-ATTTGATCAGCAGTGGCTTCTCTTACATTCAAT 335746 Query 282651 AACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCGACCGACCACGGACAGTCCTGCA 282710 | |||||| || || ||| || |||||| || | ||| || || | | || ||| Sbjct 335745 ATCTTACCCCGAAGTGGATAACAACCATAAAAATCCCTACCAACTACTGCTAAACCGGCA 335686 Query 282711 ATTGCAAGTGTTGCTGCGGAATCTCCCTCCGTCAAGATGAGAGTACA 282757 | || | | |||||||| ||||| |||| || || ||||| Sbjct 335685 ACCGCCAACGACAGAGCGGAATCACCCTCTGTCAGGACAAGCGTACA 335639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823376544980