Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq41 219 4e-52
>seq41
Length=1599359
Score = 219 bits (242), Expect = 4e-52
Identities = 595/895 (66%), Gaps = 33/895 (4%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
|| |||||| ||| | || ||||| |||||||| || || | | || || || |||
Sbjct 1218672 TGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTTTCC 1218731
Query 16736 ATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAA 16794
||||||||||| ||||| ||| | | ||||| ||| |||| | || | | ||
Sbjct 1218732 ATGAAATCAAATGGATTTGTAACGTTGAAATACTTTTTGTTACCTAAAG-CGACTAATAG 1218790
Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACG 16854
|||||| || |||||||| | |||||| ||||| ||| ||||| || | | |||
Sbjct 1218791 TCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATA-ACG 1218849
Query 16855 -TACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913
||| || | ||| ||| | ||| ||| || || || |||| ||||| | |||||
Sbjct 1218850 ATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAATCT 1218909
Query 16914 TAGCAACTCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972
| | | | || | | | ||| ||| ||| | ||| || | || ||| || |||
Sbjct 1218910 TTTCTA-TAATTGATGGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGCAAAA 1218968
Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032
|| |||||| || || ||||||| || | || || ||||| ||||| || |||||
Sbjct 1218969 TCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGCATT 1219028
Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092
|| |||||||||||||| || || || || || ||||| ||||| ||||| ||
Sbjct 1219029 AAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCTTCA 1219088
Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGT--CTTTGTTACGAATCCATT 17150
| | ||||| || | ||||| ||| ||| | | || | || | || ||||||||
Sbjct 1219089 ATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTT--GAATCCATC 1219146
Query 17151 TCTGCACCCACTCGGCTTTTTGCTTTA-----TGCAATCCATCGTTTCTATGGCCTTAAA 17205
| |||| || ||||||| ||||| || ||| || | || || || || ||
Sbjct 1219147 TAATTGCCCATTCTGCTTTTT-CTTTAATTTGTGGAAT--AT--TATCGATAGCATTGAA 1219201
Query 17206 TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265
|| || |||||| | |||| | ||||| |||||||| |||| ||| | ||
Sbjct 1219202 CAAGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGTCTC 1219261
Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325
|| || || || ||||| || ||||| || ||||| || |||||| | |||||
Sbjct 1219262 AGAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTG 1219321
Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385
|||||| | |||| || | | |||||| || ||||| || || ||||||||
Sbjct 1219322 AACTTCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAA 1219381
Query 17386 AAACGCCAATATATGCTT--AATGAAATAT------TTTTCGTCCGGTGTAAGAACGCGC 17437
||| |||| | | ||| ||||||| || || |||| | | || | |
Sbjct 1219382 AAATGCCA--AGACCCTTGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTA---TTC 1219436
Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497
|| || | || ||| || || | ||| | |||||| | ||||||||| ||| ||||
Sbjct 1219437 CAATCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCT 1219496
Query 17498 TTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCTAT 17552
| || || | |||||| |||| |||| || || |||| |||| ||||||
Sbjct 1219497 CTCTTGTAAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCTAT 1219551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545302411280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |