Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq41 219 4e-52 >seq41 Length=1599359 Score = 219 bits (242), Expect = 4e-52 Identities = 595/895 (66%), Gaps = 33/895 (4%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 || |||||| ||| | || ||||| |||||||| || || | | || || || ||| Sbjct 1218672 TGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTTTCC 1218731 Query 16736 ATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAA 16794 ||||||||||| ||||| ||| | | ||||| ||| |||| | || | | || Sbjct 1218732 ATGAAATCAAATGGATTTGTAACGTTGAAATACTTTTTGTTACCTAAAG-CGACTAATAG 1218790 Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACG 16854 |||||| || |||||||| | |||||| ||||| ||| ||||| || | | ||| Sbjct 1218791 TCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATA-ACG 1218849 Query 16855 -TACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913 ||| || | ||| ||| | ||| ||| || || || |||| ||||| | ||||| Sbjct 1218850 ATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAATCT 1218909 Query 16914 TAGCAACTCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 | | | | || | | | ||| ||| ||| | ||| || | || ||| || ||| Sbjct 1218910 TTTCTA-TAATTGATGGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGCAAAA 1218968 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 || |||||| || || ||||||| || | || || ||||| ||||| || ||||| Sbjct 1218969 TCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGCATT 1219028 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || |||||||||||||| || || || || || ||||| ||||| ||||| || Sbjct 1219029 AAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCTTCA 1219088 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGT--CTTTGTTACGAATCCATT 17150 | | ||||| || | ||||| ||| ||| | | || | || | || |||||||| Sbjct 1219089 ATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTT--GAATCCATC 1219146 Query 17151 TCTGCACCCACTCGGCTTTTTGCTTTA-----TGCAATCCATCGTTTCTATGGCCTTAAA 17205 | |||| || ||||||| ||||| || ||| || | || || || || || Sbjct 1219147 TAATTGCCCATTCTGCTTTTT-CTTTAATTTGTGGAAT--AT--TATCGATAGCATTGAA 1219201 Query 17206 TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 || || |||||| | |||| | ||||| |||||||| |||| ||| | || Sbjct 1219202 CAAGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGTCTC 1219261 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325 || || || || ||||| || ||||| || ||||| || |||||| | ||||| Sbjct 1219262 AGAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTG 1219321 Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385 |||||| | |||| || | | |||||| || ||||| || || |||||||| Sbjct 1219322 AACTTCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAA 1219381 Query 17386 AAACGCCAATATATGCTT--AATGAAATAT------TTTTCGTCCGGTGTAAGAACGCGC 17437 ||| |||| | | ||| ||||||| || || |||| | | || | | Sbjct 1219382 AAATGCCA--AGACCCTTGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTA---TTC 1219436 Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497 || || | || ||| || || | ||| | |||||| | ||||||||| ||| |||| Sbjct 1219437 CAATCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCT 1219496 Query 17498 TTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCTAT 17552 | || || | |||||| |||| |||| || || |||| |||| |||||| Sbjct 1219497 CTCTTGTAAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCTAT 1219551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545302411280