Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq41 181 1e-40 >seq41 Length=1599359 Score = 181 bits (200), Expect = 1e-40 Identities = 579/888 (65%), Gaps = 19/888 (2%) Strand=Plus/Plus Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973 || ||||| ||| | || |||||||||||||| || || | || || || |||||| Sbjct 1218672 TGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTTTCC 1218731 Query 15974 ATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAA 16032 || |||||||| ||||| ||| | | ||||| || |||| | ||| || Sbjct 1218732 ATGAAATCAAATGGATTTGTAACGTTGAAATACTTTTTGTTACCTAAAGCGACTAA-TAG 1218790 Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTA-TAAGTC 16091 |||||| || |||||||| | ||||| ||||| ||| ||| || || | ||| | Sbjct 1218791 TCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATAA--C 1218848 Query 16092 G-TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 | ||| || | ||| | | ||| || || ||| || |||| ||||| | || || Sbjct 1218849 GATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAATC 1218908 Query 16151 T---CGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCG 16207 | | | | || ||| | || ||| || | || || | | ||| || Sbjct 1218909 TTTTCTATAATTGATGGTTCTG---GTTTATTTTTCAAATGAGCGAATAACAAACAAGCA 1218965 Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267 || || ||||| ||||| ||||||| || | || || ||||| || || || ||| Sbjct 1218966 AAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGC 1219025 Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327 ||| || ||||||||||| || || |||||||| || || || ||||| ||||| Sbjct 1219026 ATTAAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCT 1219085 Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387 |||| | ||||| || | ||||| ||| ||| | | |||| ||| |||||||| Sbjct 1219086 TCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGAATCCAT 1219145 Query 16388 TTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAAT 16447 | | ||||||| ||||||| ||| || || | || || || || ||||| Sbjct 1219146 CTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACAAG 1219205 Query 16448 TTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAG 16507 || |||||| || | ||||| ||||| ||||||||| ||| | || || Sbjct 1219206 AAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGTCTCAGAA 1219265 Query 16508 TGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACT 16567 || || || || || || ||||| ||||| || || || || | ||||| ||| Sbjct 1219266 TGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAACT 1219325 Query 16568 TCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627 || | | || || ||| || ||||| |||||||| ||| || || ||||| Sbjct 1219326 TCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAAAAT 1219385 Query 16628 GCCAATATGTGCTT--AATGAAATATTTTTC---GTCAGATGTAAGAATATGCCAATCTT 16682 ||||| | ||| ||||||| || |||| || | | ||| |||||| | Sbjct 1219386 GCCAAGA--CCCTTGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTATTCCAATCAT 1219443 Query 16683 TTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTAT 16742 || ||| || || | ||| | |||||| | |||||||| ||| |||| | || | Sbjct 1219444 GTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCTTGT 1219503 Query 16743 ACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTAT 16790 | || |||||| |||| |||| || ||||||| || |||||| Sbjct 1219504 AAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCTAT 1219551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414105936720