Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq15 113 7e-20
seq43 107 3e-18
seq19 104 3e-17
>seq15
Length=954869
Score = 113 bits (124), Expect = 7e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| ||||||||||||||||| || || || || ||
Sbjct 83957 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 83898
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || ||||| || |||||||| || |||||||| || || || ||
Sbjct 83897 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGG 83838
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| |||||
Sbjct 83837 ATACCTTCTTTGTCTTG 83821
>seq43
Length=816610
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | |||||| ||||| || | || |||||||| |||||||| || ||
Sbjct 809188 CCACCACGCAATCTTAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 809247
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 809248 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 809307
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || |||||
Sbjct 809308 ATACCCTCCTTGTCTTG 809324
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || ||||| || || || |||||||| |||||||| || ||
Sbjct 809416 CCACCACGCAATCTCAAGACCAAGTGCAATGTGGATTCTTTTTGAATATTATAGTCAGAC 809475
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 809476 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 809535
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 809536 ATACCCTCCTTGTCCTG 809552
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || ||||| || | || |||||||| |||||||| || ||
Sbjct 812608 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812667
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 812668 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812727
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 812728 ATACCCTCCTTGTCCTG 812744
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || ||||| || | || |||||||| |||||||| || ||
Sbjct 812836 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812895
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 812896 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812955
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 812956 ATACCCTCCTTGTCCTG 812972
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 809644 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 809703
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 809704 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 809763
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 809764 ATACCCTCCTTGTCCTG 809780
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 809872 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 809931
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 809932 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 809991
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 809992 ATACCCTCCTTGTCCTG 810008
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 810100 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 810159
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 810160 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 810219
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 810220 ATACCCTCCTTGTCCTG 810236
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 810328 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 810387
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 810388 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 810447
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 810448 ATACCCTCCTTGTCCTG 810464
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 810556 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 810615
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 810616 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 810675
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 810676 ATACCCTCCTTGTCCTG 810692
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 810784 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 810843
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 810844 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 810903
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 810904 ATACCCTCCTTGTCCTG 810920
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 811012 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 811071
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 811072 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 811131
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 811132 ATACCCTCCTTGTCCTG 811148
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 811240 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 811299
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 811300 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 811359
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 811360 ATACCCTCCTTGTCCTG 811376
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 811468 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 811527
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 811528 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 811587
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 811588 ATACCCTCCTTGTCCTG 811604
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 811696 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 811755
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 811756 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 811815
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 811816 ATACCCTCCTTGTCCTG 811832
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 811924 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 811983
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 811984 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 812043
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 812044 ATACCCTCCTTGTCCTG 812060
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 812152 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 812211
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 812212 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 812271
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 812272 ATACCCTCCTTGTCCTG 812288
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| || |||| || | || |||||||| |||||| | || ||
Sbjct 812380 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 812439
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||| ||| ||| || | |||||| ||||| ||||||||||| ||||| || || |||
Sbjct 812440 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812499
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 812500 ATACCCTCCTTGTCCTG 812516
>seq19
Length=616425
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || || ||||||||||| || || || ||||| ||
Sbjct 593007 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGAT 593066
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | ||| || || ||||| |||||||| ||||||||||| || || || |||
Sbjct 593067 AAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 593126
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 593127 ATACCTTCCTTGTCTTG 593143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743525972472320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |