Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq41 286 3e-72 >seq41 Length=1599359 Score = 286 bits (316), Expect = 3e-72 Identities = 567/830 (68%), Gaps = 21/830 (3%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 || ||||| || ||||||||| || ||||| || || || || | |||||||| ||| Sbjct 1218669 TTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTT 1218728 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACA 16061 ||||| |||||||| |||||| | ||| | | || || | | || || | | | Sbjct 1218729 TCCATGAAATCAAATGGATTTGT--AACGTTGAAATACTTTTTGTTACCTAAAGCGACTA 1218786 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 ||| |||||| || |||||||| | || || ||||||| ||| ||||| || | || Sbjct 1218787 ATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATA 1218846 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181 | || || | || || | ||| | ||||||| || | ||| ||||| |||| | Sbjct 1218847 ACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAA 1218906 Query 16182 TATCTCTTACTACACTATTTAACGGAG--GGTTTAAT----AAGTGTTTAAACATTATAC 16235 | | || ||| || || | || |||||| | || || || | | || Sbjct 1218907 TCT---TTTCTA---TAATTGATGGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAAC 1218960 Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295 |||||||||| ||| || ||||| || || | || ||||| |||||||| || | || Sbjct 1218961 AAGCAAAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAAC 1219020 Query 16296 CTGGCATT-AGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 | |||||| | ||| || ||||| |||||| ||||| ||||| |||||||| ||||| Sbjct 1219021 CAGGCATTAAACCCTTCTTCTTTAA-CCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAA 1219079 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 |||||||||| ||| ||||||||||| |||| ||| || | || ||| || || Sbjct 1219080 ATACCTTCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGA 1219139 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 |||||| | | ||||| | |||||||| ||||| || || || || ||||| Sbjct 1219140 ATCCATCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATTG 1219199 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || || ||| |||| || ||| ||||||||||| || |||||| || | Sbjct 1219200 AACAAGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGTC 1219259 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || ||||||||||| ||||| || ||||| |||||||| || | ||||| | ||| Sbjct 1219260 TCAGAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATT 1219319 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||| | | || | ||| | || ||||| ||||| || ||||| ||| || Sbjct 1219320 TGAACTTCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCG 1219379 Query 16655 AAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTTA-ACCAG 16711 ||||| || | | | ||| ||| | |||| || || | | | ||| ||| Sbjct 1219380 AAAAATGCCAAGACCCTTGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTATTCCAA 1219439 Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 ||| | ||| ||||| | ||||| ||||| |||||||||||||||| Sbjct 1219440 TCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGC 1219489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511734055600