Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq41 277 2e-69
>seq41
Length=1599359
Score = 277 bits (306), Expect = 2e-69
Identities = 604/890 (68%), Gaps = 21/890 (2%)
Strand=Plus/Plus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
|| ||||| || |||||| || || ||||||||||| ||||| ||| ||| || |||
Sbjct 1218669 TTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTT 1218728
Query 13973 TCCATAAAATCAAATGGATTTGTTGACAT--AAACACTTTATCACAACCTAGTTCTAATA 14030
||||| ||||||||||||||||| || | ||| ||||| | | |||| | | ||
Sbjct 1218729 TCCATGAAATCAAATGGATTTGTA-ACGTTGAAATACTTTTTGTTA-CCTAAAGCGACTA 1218786
Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090
|| |||||| || | || |||| ||||| ||||| ||| ||||||||| | ||
Sbjct 1218787 ATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATA 1218846
Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150
||| || | || | ||| || |||||| || ||||| ||| | ||||
Sbjct 1218847 ACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAA 1218906
Query 14151 TAATCGTAATAATT--TCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGC 14208
| | |||||| | || || || ||| | ||| || | ||||| ||
Sbjct 1218907 TCTTTTCTATAATTGATGGTTCT--GGTTTATTTTTCAAATGAGCGAATAACAAACAAGC 1218964
Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268
|||||| ||| | || |||||||| | ||| | || |||||||| || || || ||
Sbjct 1218965 AAAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGG 1219024
Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCC 14328
||| || || || ||||||||||| || ||||| || || || || ||||| || ||
Sbjct 1219025 CATTAAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACC 1219084
Query 14329 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCC 14387
|||| ||||||||| || | ||||| ||| | || ||| || | | | || ||||
Sbjct 1219085 TTCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGA-ATCC 1219143
Query 14388 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14447
|| | | |||||||| | ||||| |||||| || | || |||||||| || |
Sbjct 1219144 ATCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACA 1219203
Query 14448 AATGTTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506
| || ||| |||| | ||| | | || ||||| || ||||| || | |||
Sbjct 1219204 AGAAATCACTTTCCTTTGGGTCTTTGA-TATAAGTATCGATCAGTAAAGAGTAAGTCTCA 1219262
Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566
|| || || |||||||| || ||||| ||||||||||| | ||||| | |||
Sbjct 1219263 GAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGA 1219322
Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626
|| |||| | || | || |||||||||||||||| ||||||||| ||| || |||
Sbjct 1219323 ACTTCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAA 1219382
Query 14627 AATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GCTGAGT---TTTTTCCAA 14680
|||||||| | || ||| || || || |||||| | | | | || ||||||
Sbjct 1219383 AATGCCAAGACCCTTGAAATGAAAAAT--CT-TTCATTCTCGTTCATTCTATTATTCCAA 1219439
Query 14681 TCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTT 14740
|| || |||||| |||||||| | ||| ||| | ||||||||| ||| | ||| |
Sbjct 1219440 TCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTC 1219499
Query 14741 TTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14790
|| || | ||| ||||| | |||| || ||||| | ||||||||
Sbjct 1219500 TTGTAAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCT 1219549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345322651280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |