Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq15 102 6e-17 seq19 100 2e-16 seq43 87.8 1e-12 >seq15 Length=954869 Score = 102 bits (112), Expect = 6e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || ||||||||||||||||||||||| | || ||| ||| ||||||| Sbjct 83939 ACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 83880 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| | ||||||||| || || | ||||| || || | Sbjct 83879 AATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGA 83820 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | |||||| | || Sbjct 83819 ATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 83760 Query 18297 CCGGTCAATGTTTTTACAAAA 18317 || ||||| ||||| || ||| Sbjct 83759 CCAGTCAAAGTTTTGACGAAA 83739 >seq19 Length=616425 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||| ||||| |||||||| || | | ||| ||| ||||||||| ||||| || Sbjct 593037 GTAGATTCCTTTTGGATGTTGTAATCAGATAAGGTTCTACCATCTTCCAACTGTTTACCA 593096 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 ||| |||| | ||||||||| || || | |||||||| || || | |||| Sbjct 593097 GCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTG 593156 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | ||| ||||||| | || ||| | ||| ||| | || || ||||| ||| Sbjct 593157 ACATTATCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTCAAAGTT 593216 Query 18309 TTTACAAAAATTTGCATTTT 18328 || |||||||||||||| || Sbjct 593217 TTGACAAAAATTTGCATCTT 593236 >seq43 Length=816610 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 18095 TTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTC 18154 ||| || || || | ||| | |||| ||| ||||| |||||||||||||| || ||||| Sbjct 809184 TTAACCACCACGCAATCTTAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTC 809243 Query 18155 GGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCAC 18214 | || ||| | | ||| |||| |||||| || || | || | ||| || || || Sbjct 809244 AGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGG 809303 Query 18215 GGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTC 18274 || | || ||||| || ||||| ||||| | ||| |||||| || || Sbjct 809304 TGGAATACCCTCCTTGTCTTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTC 809363 Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| | || || ||||| ||||| ||||| |||||||| Sbjct 809364 CACCTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGACAAAGATTTGCAT 809414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343787330270