Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq41 286 3e-72 >seq41 Length=1599359 Score = 286 bits (316), Expect = 3e-72 Identities = 606/889 (68%), Gaps = 19/889 (2%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 || ||||| || |||||| || || ||||||||||| ||||| ||| ||| || ||| Sbjct 1218669 TTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTT 1218728 Query 13641 TCCATAAAATCAAATGGATTTATTGACAT--AAACACTTTATCACAACCTAGTTCTAATA 13698 ||||| ||||||||||||||| | || | ||| ||||| | | |||| | | || Sbjct 1218729 TCCATGAAATCAAATGGATTTGTA-ACGTTGAAATACTTTTTGTTA-CCTAAAGCGACTA 1218786 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758 || ||||||||| | ||| |||| ||||| ||||| ||| ||||||||| | || Sbjct 1218787 ATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATA 1218846 Query 13759 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818 ||| || | || | ||| || |||||| || ||||| || | |||| Sbjct 1218847 ACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAA 1218906 Query 13819 TAATTGTAATAATCTCATTAGAA-GGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13877 | || ||||| | || || || ||| | ||| || | ||||| ||| Sbjct 1218907 TCTTTTCTATAAT-TGATGGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGCA 1218965 Query 13878 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13937 ||||| ||| | || |||||||| | ||| | || |||||||| || || || ||| Sbjct 1218966 AAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGC 1219025 Query 13938 ATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCC 13997 || || || || ||||||||||| || |||||||| || || || ||||| || || Sbjct 1219026 ATTAAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCT 1219085 Query 13998 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCA 14056 |||| ||||||||| || | ||||| ||| | || ||| || | | | || ||||| Sbjct 1219086 TCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGA-ATCCA 1219144 Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | | | |||||||| | ||||| |||||| || | || |||||||| || || Sbjct 1219145 TCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACAA 1219204 Query 14117 ATATTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175 | || ||| |||| | ||| | | || ||||| || ||||| || | |||| Sbjct 1219205 GAAATCACTTTCCTTTGGGTCTTTGA-TATAAGTATCGATCAGTAAAGAGTAAGTCTCAG 1219263 Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235 | || || |||||||| || ||||| |||||||| || | ||||| | ||| | Sbjct 1219264 AATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAA 1219323 Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295 |||| | | || | || |||||||||||||||| ||||||||| ||| || |||| Sbjct 1219324 CTTCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAAA 1219383 Query 14296 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAAT 14349 ||||||| | || ||| || || || |||||| ||| | | || ||||||| Sbjct 1219384 ATGCCAAGACCCTTGAAATGAAAAAT--CT-TTCATTCTCGTTCATTCTATTATTCCAAT 1219440 Query 14350 CGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTT 14409 | || |||||| |||||||| | ||| ||| | ||||||||| ||| | ||| | | Sbjct 1219441 CATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCT 1219500 Query 14410 TATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458 | || | ||| ||||| | |||| || ||||| | |||||||| Sbjct 1219501 TGTAAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCT 1219549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727724156400