Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq41 282 4e-71 >seq41 Length=1599359 Score = 282 bits (312), Expect = 4e-71 Identities = 605/889 (68%), Gaps = 19/889 (2%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 || ||||| || |||||| || || || |||||||| ||||| ||| ||| || ||| Sbjct 1218669 TTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTT 1218728 Query 13429 TCCATAAAATCGAATGGATTTGTTGACAT--AAACACTTTATCACAACCTAGTTCTAATA 13486 ||||| ||||| ||||||||||| || | ||| ||||| | | |||| | | || Sbjct 1218729 TCCATGAAATCAAATGGATTTGTA-ACGTTGAAATACTTTTTGTTA-CCTAAAGCGACTA 1218786 Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546 ||| ||||||||| | ||| |||| ||||| ||||| ||| ||||||||| | || Sbjct 1218787 ATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATA 1218846 Query 13547 GTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606 ||| || | || | ||| || |||||| || ||||| ||| | |||| Sbjct 1218847 ACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAA 1218906 Query 13607 TAATCTTAATAATGTCATTAGAA-GGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13665 | | | ||||| | || || || ||| | ||| || | ||||| ||| Sbjct 1218907 TCTTTTCTATAAT-TGATGGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGCA 1218965 Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725 ||||| ||| | || |||||||| | ||| | || |||||||| || || || ||| Sbjct 1218966 AAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGC 1219025 Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785 || || || || ||||||||||| || ||||| || || || || ||||| || || Sbjct 1219026 ATTAAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCT 1219085 Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCA 13844 |||| ||||||||| || | || || ||| | || ||| || | | |||| ||||| Sbjct 1219086 TCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGA-ATCCA 1219144 Query 13845 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | | | |||||||| | ||||| |||||| || | ||||| |||||||| || Sbjct 1219145 TCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACAA 1219204 Query 13905 ATGTTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 13963 || ||| |||| | ||| | | || ||||| || ||||| || | |||| Sbjct 1219205 GAAATCACTTTCCTTTGGGTCTTTGA-TATAAGTATCGATCAGTAAAGAGTAAGTCTCAG 1219263 Query 13964 AGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14023 | || || ||||| || || ||||| ||||||||||| | ||||| | ||| | Sbjct 1219264 AATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAA 1219323 Query 14024 CCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAA 14083 | || | | || | ||| |||| ||||||||||| ||||||||| ||| || |||| Sbjct 1219324 CTTCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAAA 1219383 Query 14084 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAAT 14137 ||||||| | || ||| || || || |||||| ||| | | || ||||||| Sbjct 1219384 ATGCCAAGACCCTTGAAATGAAAAAT--CT-TTCATTCTCGTTCATTCTATTATTCCAAT 1219440 Query 14138 CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTT 14197 | || |||||| |||||||| | ||| ||| | ||||||||| ||| | ||| | | Sbjct 1219441 CATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCT 1219500 Query 14198 TATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14246 | || | ||| ||||| | |||| || ||||| | |||||||| Sbjct 1219501 TGTAAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCT 1219549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588524811440