Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq27 450 2e-121 seq41 221 2e-52 >seq27 Length=921605 Score = 450 bits (498), Expect = 2e-121 Identities = 1464/2257 (65%), Gaps = 53/2257 (2%) Strand=Plus/Plus Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCC 70850 ||| || | ||| || ||||| | | || || |||| || | || || ||||| || Sbjct 394099 CTTATCAATTGTGAATTGAATAGCTGCAGAAGCTGCTTGTGTTCTCAGGTAATACATACC 394158 Query 70851 TGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAG 70909 |||||| | || | |||| |||||||| |||||||| || | || || | | | Sbjct 394159 TGTTTTCAATCCCATCTTCCAACCGTAAAAGTGCATACTGGTCAACTTACCCATCGTTGG 394218 Query 70910 -GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 | ||| |||| |||||||| || ||| ||||||||| || || | | ||| || Sbjct 394219 TGCACGGATATG--AATATTCAAGGAGTGAGATTGATCGATAAAAGCAGCACGGTCAGCT 394276 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAAT 71027 ||||||| ||||| ||||||| |||||||| | ||| || || | ||| | ||| Sbjct 394277 GCCATTTCAATGATATGTTTTTGTGAGATTTCCCACACAGTCTTGTATAGCTCTTTCAAT 394336 Query 71028 ATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTT 71084 || | |||| ||| | ||| ||||| || ||| |||| || || | ||| Sbjct 394337 -TCCTGAGGAATGTTAGGTAGATTTTGAATAGAACCATTGTCTGTGATGATGTGTTGTTT 394395 Query 71085 GATCTCTTCATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGAGGATTAAC 71141 || |||| ||||| | | | || ||| | | | | || |||||||| Sbjct 394396 CATACTATCATCCCATA---TCCCCAAATCAACCAAATCACGTAACAAATACGGATTAAC 394452 Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 | ||||||||| |||||||| || | ||| | || || || ||| | || || | Sbjct 394453 GATTTGAAATTCACCAGACAAAACACGACGGGAATACATGTTCGAGGTGAATGGCTCGAA 394512 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 | ||||||| ||| |||||||||| ||||||||||| ||||| ||||||| | ||| Sbjct 394513 ACATTCATTATATCCTAAAATTTGAGATGTTGATGCAGTTGGCATTGGTGCCAAGAGTAG 394572 Query 71262 ACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATC 71321 | ||| || | ||||||| ||||| | ||| | || ||||||| ||| || || Sbjct 394573 AGAATTCCTGATACCATGTTCCTTAATTTTCTGTTTCAAAGTGTCCCAATCCCAGAGGTC 394632 Query 71322 CGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGC 71381 | ||| | || | | | | || ||| | Sbjct 394633 GGTTGGCTTTGTATTCCACATATCATATTGCAAAACACCTTGAGAAACTGGAGAACCTTC 394692 Query 71382 ATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATA 71441 ||| || || ||||| || ||||||| || | |||||| | || ||||| | | Sbjct 394693 ATAGGTTTCATATGGACCATCTTTTTGAGCCAATTCACAGGATGATTCCAATGCGGCGTG 394752 Query 71442 ATAAATGGTTTCGAAAATCTTCTTATTGA-GATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 |||||||||||| || || | |||| | | ||||| || || | || |||||| Sbjct 394753 ATAAATGGTTTCAAAGATTTGAATATTCAAGTTCTTG-GCCTCTTGAGACTCGAATGGAA 394811 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | ||| | || || | || || || || | ||| || | | ||||||||||||| | Sbjct 394812 CACGTAACATCATGAATGTATCAGCCAAACCATTAACACCTAGAGCGATAGGTCTGTGCC 394871 Query 71561 TCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 71620 || | ||||| ||| |||||| || |||||||| ||| || || | ||| || | Sbjct 394872 TCATGTTAGAGTTTTTAGCTTCAATAACTGGATAATAGTTACGGTCAATGACTTTGTTTA 394931 Query 71621 GATTTCTGACTATTA-CTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC-------- 71671 ||| | || || || | || | | || | ||| | ||| | | | | Sbjct 394932 AATTAC-GAGTAATAACCTTAGCAATTTCGTGTAGCCTAGCAAAGTTATACCATTGGGTC 394990 Query 71672 -TCCCATCTA-------TTACAAACACGTT--CAAGGCAACAGATGCCAGATTACAAACG 71721 | |||||| || | ||| | | ||| |||| || || ||||||||||| Sbjct 394991 TTACCATCTTCCGCTGTTTGAATACAGGATGGCAACGCAATGGAAGCTAGATTACAAACA 395050 Query 71722 GCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATG 71781 || ||||| | | | | |||| || ||||||| || | ||| | | ||||| Sbjct 395051 GCAGTCTCATCTGGAGCAGAGTATTCTACAATTTCACAACATAAGTTAGAAGATTTGATA 395110 Query 71782 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGA 71841 || |||||||| | || |||||||| ||||||| ||||||||||| || || || || Sbjct 395111 GTACCTAAATTCTTCTGGTTACTCTTCGTGTTACAAGCATCCTTATATAGCATGAATGGG 395170 Query 71842 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA 71901 |||||||||||| | |||| || | || || | ||| | || | ||||| | Sbjct 395171 GTACCAGTTTCAGTTTGAGCCTCCAAGATGGCGTACCACAATT-TCTGGGCTTTAATGGT 395229 Query 71902 TTCTTGTATCTCTTTTCTCTTT--CGTATTGTGTATATAATCGTTCGAACTCGTCTCCCC 71959 || || || | | |||| |||| || ||||| ||||||||| || | Sbjct 395230 TT-TTCTACCGCGACCCTCTGCAACGTAACGTTCGTATAACTCTTCGAACTCTTCGGCAT 395288 Query 71960 AAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCAT 72019 || ||| |||| || || |||| | ||| | | ||| | |||||| || | || | Sbjct 395289 AAACATCAGCTAAACCTGGCGCTTCACTTGGAGAAAACAAGGTCCACTCACCGTTTTCTT 395348 Query 72020 TTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTAT 72079 || |||||||| || | ||||||||||||||| ||| ||||| |||||||| | | Sbjct 395349 GGACACGTTTCATGAATAAATCAGGAATCCAAAGTGCTGGAAATAAATCTCTGGCACGAA 395408 Query 72080 GCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 72139 || || || || ||| ||| ||| ||| | ||| | | ||| || | |||||| | Sbjct 395409 TTTCTTCCTTACCGTGATTTTTTCTAATATCAATGAAATCGAAAATGTCTGCATGCCATG 395468 Query 72140 GTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 72199 |||| | ||||| || | | | || || | |||||| || || || || | || | || Sbjct 395469 GTTCAAGGTATAAAGCAAAAGCGCCTGGTCTTTTGTTACCACCTTGGTCGACATAACGAG 395528 Query 72200 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGG 72259 | || || ||| | |||| | ||| || || | ||| || || | |||||| || || | Sbjct 395529 CAGTATTGTTAAAGACTCGAATCATGGGGATTAAACCGTTAGAGGTACCATTAGTACCTG 395588 Query 72260 AGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTT 72319 || ||| || | | |||||| || || ||| || || || || || ||| Sbjct 395589 CAATGTAGGAACCGGTAGAACGAATGTTATGGATATGTAGCCCAATACCACCAGCAGTTT 395648 Query 72320 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 72379 | || || | || ||| || || |||||||| || || || ||| ||| ||| ||| Sbjct 395649 TGGAAATCATAGCACATTCCTTCAAGGTATCATAAATTCCTTCAATAGAATCGTCCTTCA 395708 Query 72380 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 72439 | | || ||||| ||||||||| | || ||| || || || ||||| || | Sbjct 395709 TAGCTACTAAGAAACATGAAGACATTTGTGGGTGAGGAGTACCAGCGTTGAATAAAGTTG 395768 Query 72440 GAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTA 72499 |||| || || | || | || ||||| | ||||| || || ||| | || | | Sbjct 395769 GAGATGCATGGATGAAATACCTTAGAGACATCAAGTTGTAAGTTTCTATAACGGACTTGA 395828 Query 72500 TATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGA 72559 |||| ||| || || || | || | ||| | | ||| ||||| | |||| | | Sbjct 395829 TATCTGTACCATGGATACCAACTGATACTCTCATGATTAAATGTTGAGGACGTTCAGCAA 395888 Query 72560 TCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 72619 || ||| | ||| || || || |||||| || ||||| ||||| |||||| Sbjct 395889 CCTCACCATTCGTCCTCAGCAGATAAGAACGTTCCAATGTCTTAAATCCAAAGTAGTTGA 395948 Query 72620 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTA 72679 || ||| || | || || | ||| | || || | || ||||| | || |||| | Sbjct 395949 ATTGAAAATCCCTATCATAGACTATAGCAGAGTTTAATTCGTCCTTGTTTTCCATAACGA 396008 Query 72680 TATCCATGGTGA-TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACAT 72736 |||| | || | ||| ||||| || ||||| ||| ||||||||| ||||| |||| Sbjct 396009 TATC---GTAGACTTCTTGAGAAATCATAGGAGAGTGTACCCCATTTTTTGGATTCACAT 396065 Query 72737 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTG 72796 || ||||||| || |||| |||||||| |||||| || |||||||| | Sbjct 396066 AGGAATATAAATCAGTAATAACTTGCGAGAATAGTTTCGTTGTTTGTTTATGTAGATTCG 396125 Query 72797 ATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCT 72855 | | ||| ||||| || |||||| |||||||||| ||||| || || || || ||| Sbjct 396126 AAATGGCAATTCTAGCAGCTAGAGTGGCATAATCAGGATGCACCGTTGT-CATGTAGGCA 396184 Query 72856 GCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGG 72915 | |||| || || | | |||| ||||| || || || || || | ||| | ||| Sbjct 396185 CATGTTTCAGCAGCTAAATTGTCTAATTCAACAGTAGTGACACCTTCATAGACACCTGAA 396244 Query 72916 AT--AACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATA 72973 || || || || ||| || | || ||| |||||| | | || || |||||||||| Sbjct 396245 ATTATACGTT--GAGTTATCTTGACAGCATCAATATGAGCTGGGTCCAACCCATAACATA 396302 Query 72974 ATTTTCTAATACGAGACGTGATTTTATCAAACATAAC 73010 | | ||||| | |||||||| ||||| |||| Sbjct 396303 AACGTGAGATACGGGCTGTGATTTTGTCAAATCTAAC 396339 >seq41 Length=1599359 Score = 221 bits (244), Expect = 2e-52 Identities = 582/873 (67%), Gaps = 28/873 (3%) Strand=Plus/Plus Query 41795 TTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 41854 || ||||| || |||||||| || ||||||| || ||||||||||||||||| ||||| Sbjct 1218690 TTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTTTCCATGAAATCAAATGGATTT 1218749 Query 41855 GTAACATT---ATAAAtttttttAAATCCCAATTC-AGAAATCAATCTATCTGCGATGAA 41910 ||||| || ||| |||| ||| || || | | ||| | |||||| |||| || Sbjct 1218750 GTAACGTTGAAATACTTTTTGTTA---CCTAAAGCGACTAAT-AGTCTATCAGCGACAAA 1218805 Query 41911 TTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAGTTTAACTGGAAGAGCCA 41969 ||| | ||| ||||| | || |||||| || | ||| || |||| | ||| Sbjct 1218806 TTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATAACGATA-CTGGCAAAGCAT 1218864 Query 41970 CAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTT 42029 | | | | || || |||||| || || || || ||||| | || | || | Sbjct 1218865 CCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAATCTTTTCTA-TAATTGAT 1218923 Query 42030 CACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCC 42088 || ||| || ||||| || | |||||| || ||||| || | ||| Sbjct 1218924 GGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGCAAAATCTGTATGTAAACCT 1218983 Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| | ||| || || || ||||| || | || ||||||| || ||| || Sbjct 1218984 TCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGCATTAAACCCTTCTTCTTT 1219043 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCA 42208 | |||||| |||| ||||| || ||||| ||||| || ||||| | ||| ||||| ||| Sbjct 1219044 AACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCTTCAATTGCAGCAAATGCA 1219103 Query 42209 ATAAGTCTCTCTCCATAACCGGCACTG---TCATGTATCCACTTTTGAGCCCAATCGGCC 42265 | | ||| || | || ||| || || || ||||| | ||||| || || Sbjct 1219104 ACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGAATCCATCTAATTGCCCATTCTGCT 1219163 Query 42266 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTA 42325 || | ||| | || || | || || ||||| || | | | |||| || Sbjct 1219164 TTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACAAGAAATCACTTTCCTTTGGG 1219223 Query 42326 TCTTTAACATATGTATCGATCA--AAAGACTATACATTTCTGAATGAATGTTTTCAATGG 42383 ||||| | ||| |||||||||| ||||| || | || |||||||| ||||| || Sbjct 1219224 TCTTTGATATAAGTATCGATCAGTAAAGAGTAAG--TCTCAGAATGAATATTTTCCATCA 1219281 Query 42384 CCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGT--ACAAAATCG 42441 || ||||| || || ||||| |||| || | || || ||||||| | ||| || Sbjct 1219282 TAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAACTTCTGCTGAGAAATTC- 1219340 Query 42442 TTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTT 42501 || | |||||||| || || || || ||| || || ||||| ||||| || | Sbjct 1219341 -TCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAAAATGCCAAGACCCTTGA 1219399 Query 42502 TATAAAATATTTTTCGTCCGGTGTTAATT----TATTCCAATCATTGATATCTTTAGATA 42557 || ||| || |||| | | ||| ||| |||||||||||| ||||| || || | Sbjct 1219400 AATGAAAAATCTTTCATTCTC-GTTCATTCTATTATTCCAATCATGTATATCCTTTGAAA 1219458 Query 42558 TATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATAT 42617 ||| | |||||| | |||||||| || |||||||| | || || | ||| || | Sbjct 1219459 GATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCTTGTAAGCTTGCCAAATTT 1219518 Query 42618 CATGATATTGAATTGGGAAAATAACAAATCTAT 42650 ||||||||| ||||| || | ||||||||||| Sbjct 1219519 CATGATATTTGATTGGAAATAAAACAAATCTAT 1219551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138814094960