Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq43 96.9 4e-15
seq41 95.1 1e-14
seq15 91.5 1e-13
seq19 89.7 5e-13
>seq43
Length=816610
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || || | ||| || || || | ||| ||||||||||| || || || || |
Sbjct 812608 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812667
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || || || |||||||||||||| | |||| | ||||| || || ||
Sbjct 812668 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812727
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || || ||||| |||||| ||| | | || | ||||||| || ||| ||
Sbjct 812728 ATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACC 812787
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | ||||| || ||||| ||||| || ||||||||||||
Sbjct 812788 TCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCATA 812835
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || || | ||| || || || | ||| ||||||||||| || || || || |
Sbjct 812836 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812895
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || || || |||||||||||||| | |||| | ||||| || || ||
Sbjct 812896 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812955
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || || ||||| |||||| ||| | | || | ||||||| || ||| ||
Sbjct 812956 ATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACC 813015
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | ||||| || ||||| ||||| ||||| ||||||||
Sbjct 813016 TCCAACGTAATAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCAT 813062
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || || | ||| || || || | ||| ||||||||||| || || || || |
Sbjct 809416 CCACCACGCAATCTCAAGACCAAGTGCAATGTGGATTCTTTTTGAATATTATAGTCAGAC 809475
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || || || |||||||||||||| | |||| | ||||| || || ||
Sbjct 809476 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 809535
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || || ||||| |||||| ||| | | || ||||||| || ||| ||
Sbjct 809536 ATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAGTGGTGTCCGAGGATTCCACC 809595
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | ||||| || ||||| ||||| || ||||||||||||
Sbjct 809596 TCCAACGTAATAGTCTTCCCTGTCAACGTTTTGACAAATATTTGCATA 809643
Score = 82.4 bits (90), Expect = 8e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032
|| || || || | ||| ||||||||||| || || || || || || || ||
Sbjct 809203 AAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCC 809262
Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092
|| |||||||||||||| | |||| | ||||| || || || || || || |||||
Sbjct 809263 TCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCT 809322
Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152
|||||| ||| | | || | ||||| | || ||| || || | || | |||
Sbjct 809323 TGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATAGTC 809382
Query 143153 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| || ||||| ||||| || || |||||||||
Sbjct 809383 TTACCTGTCAAAGTTTTGACAAAGATTTGCATA 809415
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || || | ||| || | || | ||| ||||||||||| || || | || |
Sbjct 812380 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 812439
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | || || |||||||||||||| | |||| | ||||| || || ||
Sbjct 812440 AGAGTTATGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812499
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || || ||||| |||||| ||| | | || | ||||||| || ||| ||
Sbjct 812500 ATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACC 812559
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | ||||| || ||||| ||||| || ||||||||||||
Sbjct 812560 TCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCATA 812607
>seq41
Length=1599359
Score = 95.1 bits (104), Expect = 1e-14
Identities = 272/417 (65%), Gaps = 11/417 (3%)
Strand=Plus/Minus
Query 50327 TCAACGCTTTCGATAATATTTCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50386
|||| ||| ||||||||||| | | |||| | || |||||| | | |||||
Sbjct 1219200 TCAATGCTATCGATAATATTCCACAAATTAAAGAAAAAGCAGAATGGGCAATTAGATGGA 1219141
Query 50387 CTaaaaacaaaaaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTG 50446
| || | | || | ||| || ||| | ||||| || ||||| | ||||||||
Sbjct 1219140 TTCAAGATAGCAATGCAATTTTCGCTGAAAGATTAGTTGCATTTGCTGCAATTGAAGGTA 1219081
Query 50447 TGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCG 50506
| || || || ||| |||||| || || |||| | || | || ||||||| |
Sbjct 1219080 TTTTCTTCTCTGGTTCCTTTGCTGCTATCTTTTGGTTAAAGAAGAAGGGTTTAATGCCTG 1219021
Query 50507 GCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGT 50566
| | || ||| || |||||||||| | || ||||| | || ||||| ||||| |
Sbjct 1219020 GTTTGACCTTTTCAAATGAGTTGATTTGCAGAGATGAAGGTTTACATACAGATTTTGCTT 1218961
Query 50567 GTTTGTACTACAATACGCGCGTAAATGAAAAAT-TATCATACGAAACAATTTTGG---AC 50622
|||||| || ||| | |||||||| | || | | ||||| | | |
Sbjct 1218960 GTTTGT-------TATTCGCTCATTTGAAAAATAAACCAGAACCATCAATTATAGAAAAG 1218908
Query 50623 ATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCA 50682
|| ||| ||||| || || || |||||| | ||||| ||| ||||| || || |
Sbjct 1218907 ATTATCACCGAAGCTGTTGAAATTGAAAAAAGATATTTCATGGATGCTTTGCCAGTATCG 1218848
Query 50683 TTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGA 50739
|| ||||| ||||| || || | ||| | | ||| |||| ||||| || || |||
Sbjct 1218847 TTATTGGGTATGAATGCCGATCTAATGAACCAATACGTTGAATTTGTCGCTGATAGA 1218791
>seq15
Length=954869
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | ||| || || || | |||||||||||||| |||||||| || |
Sbjct 83957 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 83898
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||| ||||||||| |||| | | ||| || || || ||
Sbjct 83897 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGG 83838
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || || | | || | ||||| | | ||| |||
Sbjct 83837 ATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 83778
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175
|| | ||| | ||||| || ||||| ||||| |||||
Sbjct 83777 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAA 83740
>seq19
Length=616425
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | ||| ||||| || | |||||||| ||||| |||||||||||
Sbjct 593007 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGAT 593066
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | |||||||||||| |||||| | ||| || || || ||
Sbjct 593067 AAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 593126
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| || || || | | || | ||||| | | ||| |||
Sbjct 593127 ATACCTTCCTTGTCTTGGATCTTAGACTTGACATTATCAATAGTGTCAGAAGATTCAACT 593186
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | ||||| || ||||| ||||| || || ||||||||
Sbjct 593187 TCTAAGGTAATGGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCAT 593233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014108466720
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