Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq41 269 2e-67 >seq41 Length=1599359 Score = 269 bits (298), Expect = 2e-67 Identities = 568/833 (68%), Gaps = 27/833 (3%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 || ||||| ||| |||||| || || || ||||| || || || | || ||||| ||| Sbjct 1218669 TTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTT 1218728 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAAC-----AATAGTATTTTTTACACCCTAATTCTA 12974 ||||| ||||| || |||||| | ||| |||| | ||| |||| |||| | | Sbjct 1218729 TCCATGAAATCAAATGGATTTGT--AACGTTGAAATACTTTTTGTTAC---CTAAAGCGA 1218783 Query 12975 GTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034 ||| | ||| ||||| ||||| || | ||| || ||||||| ||| ||||| || | Sbjct 1218784 CTAATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCA 1218843 Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCG---A 13091 ||| ||| |||| ||| || | ||| | ||||||| || ||||| |||||| | Sbjct 1218844 ATAACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGA 1218903 Query 13092 TAACTATGTCTCTTATT-ACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATA 13150 ||| | ||| | ||| | | | ||| || |||| | ||| || | || | Sbjct 1218904 TAATCTTTTCTATAATTGATGGT-TCT---GGTTTATTTTTCAAATGAGCGAATAACAAA 1218959 Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || |||||||| || || ||||||||||| | || | ||| |||||||| || | | Sbjct 1218960 CAAGCAAAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAA 1219019 Query 13211 CCCGGCA-TAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 || |||| ||| |||| || ||||| |||||| ||||||||||| ||||| || || || Sbjct 1219020 CCAGGCATTAAACCCTTCTTCTTTAA-CCAAAAGATAGCAGCAAAGGAACCAGAGAAGAA 1219078 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC 13329 || ||||||| ||| ||||| || | || |||||| | | | ||| || | Sbjct 1219079 AATACCTTCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTG 1219138 Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389 ||||| | | ||||| | |||||||| ||||| ||||| || || || || Sbjct 1219139 AATCCATCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATT 1219198 Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACAT 13449 || || ||| ||||||| |||| ||||||||||| |||| ||| || | Sbjct 1219199 GAACAAGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGT 1219258 Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509 || |||||||||||||||||| ||||| || ||||||||||| | || || | | Sbjct 1219259 CTCAGAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAAT 1219318 Query 13510 CTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGC 13569 |||||||| | | || | ||| | || ||||| ||||| || || ||| ||| || Sbjct 1219319 TTGAACTTCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGC 1219378 Query 13570 aaaaaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACA-ACT-TTA-AC 13624 ||||| || | | ||| ||| || | |||| || || || || ||| | Sbjct 1219379 GAAAAATGCCA--AGACCCTTGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTATTC 1219436 Query 13625 CAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677 ||||| | | ||| ||||| | ||| | || ||| | |||||||||||||| Sbjct 1219437 CAATCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGC 1219489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982158380492