Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq41 269 2e-67
>seq41
Length=1599359
Score = 269 bits (298), Expect = 2e-67
Identities = 568/833 (68%), Gaps = 27/833 (3%)
Strand=Plus/Plus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
|| ||||| ||| |||||| || || || ||||| || || || | || ||||| |||
Sbjct 1218669 TTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTT 1218728
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAAC-----AATAGTATTTTTTACACCCTAATTCTA 12974
||||| ||||| || |||||| | ||| |||| | ||| |||| |||| | |
Sbjct 1218729 TCCATGAAATCAAATGGATTTGT--AACGTTGAAATACTTTTTGTTAC---CTAAAGCGA 1218783
Query 12975 GTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034
||| | ||| ||||| ||||| || | ||| || ||||||| ||| ||||| || |
Sbjct 1218784 CTAATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCA 1218843
Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCG---A 13091
||| ||| |||| ||| || | ||| | ||||||| || ||||| |||||| |
Sbjct 1218844 ATAACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGA 1218903
Query 13092 TAACTATGTCTCTTATT-ACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATA 13150
||| | ||| | ||| | | | ||| || |||| | ||| || | || |
Sbjct 1218904 TAATCTTTTCTATAATTGATGGT-TCT---GGTTTATTTTTCAAATGAGCGAATAACAAA 1218959
Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210
|| |||||||| || || ||||||||||| | || | ||| |||||||| || | |
Sbjct 1218960 CAAGCAAAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAA 1219019
Query 13211 CCCGGCA-TAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269
|| |||| ||| |||| || ||||| |||||| ||||||||||| ||||| || || ||
Sbjct 1219020 CCAGGCATTAAACCCTTCTTCTTTAA-CCAAAAGATAGCAGCAAAGGAACCAGAGAAGAA 1219078
Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC 13329
|| ||||||| ||| ||||| || | || |||||| | | | ||| || |
Sbjct 1219079 AATACCTTCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTG 1219138
Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389
||||| | | ||||| | |||||||| ||||| ||||| || || || ||
Sbjct 1219139 AATCCATCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATT 1219198
Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACAT 13449
|| || ||| ||||||| |||| ||||||||||| |||| ||| || |
Sbjct 1219199 GAACAAGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGT 1219258
Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509
|| |||||||||||||||||| ||||| || ||||||||||| | || || | |
Sbjct 1219259 CTCAGAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAAT 1219318
Query 13510 CTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGC 13569
|||||||| | | || | ||| | || ||||| ||||| || || ||| ||| ||
Sbjct 1219319 TTGAACTTCTGCTGAGAAATTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCGGC 1219378
Query 13570 aaaaaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACA-ACT-TTA-AC 13624
||||| || | | ||| ||| || | |||| || || || || ||| |
Sbjct 1219379 GAAAAATGCCA--AGACCCTTGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTATTC 1219436
Query 13625 CAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677
||||| | | ||| ||||| | ||| | || ||| | ||||||||||||||
Sbjct 1219437 CAATCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGC 1219489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982158380492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |