Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq15 174 2e-38 >seq15 Length=954869 Score = 174 bits (192), Expect = 2e-38 Identities = 366/540 (68%), Gaps = 33/540 (6%) Strand=Plus/Minus Query 6719 ACAAT-TCAAAATCTTCAAATTTAAAATCACATAAATTATCAGACtttttttttAATATT 6777 ||||| | |||||| || || ||||||| | |||||| ||||||| || |||| || Sbjct 130030 ACAATCTGAAAATCGTCGAAGGCAAAATCATCAATATTATC-GACTTTTCTTGTAATTTT 129972 Query 6778 ACAACAGGTGAAGGTTTTATTGA---TCGAGTTAATTGTTCTTTTATAGCTTTTATATGA 6834 | | | ||| || | | | || | | | |||||| | | ||| | | |||| Sbjct 129971 T-AGCTGAGGAAA-TTCTGTGGGCGTTCTACTCATTTGTTCCCTCAAAGCGTCCACATGA 129914 Query 6835 TCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACA 6894 || ||| | ||| |||||||| | |||||||| || |||||||| | ||||||| | Sbjct 129913 TCCTTATACACATGTGCATCTCCCATTGTATGAATGAACTCACCTGGATCCATATCACAA 129854 Query 6895 GCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAAT 6954 | || || || | | || || || || || ||||| | ||||| || || |||||| Sbjct 129853 ACATGCGCTATCATCTTGGTCAACAAGGCGTAGGAAGCAATGTTAAATGGAACTCCTAAT 129794 Query 6955 CCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTAT---------- 7004 |||||||| |||||||||||| | ||| || | || ||||| Sbjct 129793 CCCATATCACATGATCTTTGATATAACAAACAGGAAAGTTTAG-GTCTACCTCCATTTCC 129735 Query 7005 ------AG---CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCT-- 7053 || |||| |||||| | |||||||| ||||| |||||| ||| | | Sbjct 129734 AGGGAAAGTGACATAGAATTGAGAAAATACATGGCATGGTGGTAAA---GCCATAAGTGG 129678 Query 7054 -ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAA 7112 | ||| | |||||||| ||| |||| | | | |||||||| |||||| |||||||| Sbjct 129677 AAAATCCGGGGGATTCCATGCACTCATAATTAGTCTTCTATCATATGGATTCGTTTTTAA 129618 Query 7113 TTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATT 7172 ||| || || | |||||||| || | || || || |||| || ||| | Sbjct 129617 TTTAGTAATTAAATCCTGTAATTGGTCAACTCCTTGGCCACTGTAATCGTCATCACATGT 129558 Query 7173 TATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTC 7232 |||| || ||||||||||| |||||||||||||| |||| ||| |||||||||||||| Sbjct 129557 CTTATACTTTGCTCCAAAATGCCTCCATTGAAACCCGTAAACAGGTCCTAAATCACCTTC 129498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871657373600