Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq19 141 8e-29 seq15 136 4e-27 seq43 118 1e-21 >seq19 Length=616425 Score = 141 bits (156), Expect = 8e-29 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| || ||||||||||||||||||||||| | ||| ||||| Sbjct 593007 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAG-- 593064 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| ||| | ||| |||| |||||| || ||||||| |||||||| || || || | Sbjct 593065 ATAAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 593124 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| ||||| | || || | |||||| | | |||||||| || | Sbjct 593125 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTATCAATAGTGTCAGAAGATTCAA 593184 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || ||||| || ||||| | |||||| ||||| || ||||| Sbjct 593185 CTTCTAAGGTAATGGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCAT 593233 >seq15 Length=954869 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||| ||||||||||| ||||| | ||| || || | Sbjct 83957 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 83898 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||| || || || |||||||||||||||| || || || || Sbjct 83897 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGG 83838 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||||||||| | ||| || | |||||| | | | |||||||| || || Sbjct 83837 ATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 83778 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || | |||||||| || ||||| | |||||| || || Sbjct 83777 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAA 83740 >seq43 Length=816610 Score = 118 bits (130), Expect = 1e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || || | ||||| ||| ||||||||||| || ||||| ||||| | |||| Sbjct 809408 TTTGCATACCACCACGCAATCTCAAGACCAAGTGCAATGTGGATTCTTTTTGAATATTAT 809467 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || ||| || ||||||||| ||||| || | || || ||||| ||||| | Sbjct 809468 AGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGT 809527 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| |||||||| || ||||| | |||||| | ||||| | | ||||| | | Sbjct 809528 CTGGGGGAATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAGTGGTGTCCGAGG 809587 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | ||| || || || || || | ||||| ||||| || ||||| Sbjct 809588 ATTCCACCTCCAACGTAATAGTCTTCCCTGTCAACGTTTTGACAAATATTTGCAT 809642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290942232560