Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq41 123 4e-24 seq19 107 3e-19 >seq41 Length=1599359 Score = 123 bits (136), Expect = 4e-24 Identities = 192/272 (71%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||| ||||| | | ||| |||| |||||||||| || || || || ||||||||||| Sbjct 545754 GCTAAACGTCACAGAAAGAT-TCTTAGAGATAACATTCAGGGTATTACTAAGCCAGCTAT 545812 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | || | | ||||| || || ||| | ||||| || |||||||||| | Sbjct 545813 CAGAAGATTAGCAAGAAGAGGTGGTGTTAAACGTATTTCTGGTTTAATCTATGAAGAAGT 545872 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||||||||| | ||| | || | |||||| |||||| | ||| || || Sbjct 545873 CAGAGCTGTTTTGAAAACTTTCTTGGAGTCTGTTATCAGAGATGCTGTTACCTACACTGA 545932 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| | ||||| || || || ||||| | |||||||| ||||| | ||||| Sbjct 545933 ACACGCTAAGAGAAAGACAGTTACATCTTTGGATGTTGTCTATGCTTTGAAGAGACAAGG 545992 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 | | | |||||||| || |||||| || Sbjct 545993 TAGAACCCTGTATGGTTTCGGTGGTTAATTTT 546024 >seq19 Length=616425 Score = 107 bits (118), Expect = 3e-19 Identities = 184/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||| | | | ||| |||||||||| ||||| ||||| || ||||||||| Sbjct 386922 GCTAAGCGTCATAGAAAAATTCTAAGAGATAACATTCAAGGTATCACTAAACCAGCTATC 386981 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | | | || | | ||||| || || ||| | ||||| || | || ||||| || Sbjct 386982 AGAAGATTAGCAAGAAGAGGTGGTGTTAAACGTATTTCTGGTTTAATTTACGAAGAAGTT 387041 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 | | |||||| || | || | | |||| || |||||| | ||||| || Sbjct 387042 AGAGCTGTTTTAAAAACATTTTTAGAATCCGTCATTAGAGATGCTGTTACTTATACTGAA 387101 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | |||||||| || ||| ||||| | || ||||| ||||| | ||||| Sbjct 387102 CACGCAAAGAGAAAGACTGTTACATCCTTGGATGTTGTTTATGCTTTGAAGAGACAAGGT 387161 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 387162 AGAACCTTGTATGGTTTCGGTGGTTAA 387188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075157941878