Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq41 123 4e-24
seq19 107 3e-19
>seq41
Length=1599359
Score = 123 bits (136), Expect = 4e-24
Identities = 192/272 (71%), Gaps = 2/272 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||| ||||| | | ||| |||| |||||||||| || || || || |||||||||||
Sbjct 545754 GCTAAACGTCACAGAAAGAT-TCTTAGAGATAACATTCAGGGTATTACTAAGCCAGCTAT 545812
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | || | | ||||| || || ||| | ||||| || |||||||||| |
Sbjct 545813 CAGAAGATTAGCAAGAAGAGGTGGTGTTAAACGTATTTCTGGTTTAATCTATGAAGAAGT 545872
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||||||||| | ||| | || | |||||| |||||| | ||| || ||
Sbjct 545873 CAGAGCTGTTTTGAAAACTTTCTTGGAGTCTGTTATCAGAGATGCTGTTACCTACACTGA 545932
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| | ||||| || || || ||||| | |||||||| ||||| | |||||
Sbjct 545933 ACACGCTAAGAGAAAGACAGTTACATCTTTGGATGTTGTCTATGCTTTGAAGAGACAAGG 545992
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703
| | | |||||||| || |||||| ||
Sbjct 545993 TAGAACCCTGTATGGTTTCGGTGGTTAATTTT 546024
>seq19
Length=616425
Score = 107 bits (118), Expect = 3e-19
Identities = 184/267 (69%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|||||||||||| | | | ||| |||||||||| ||||| ||||| || |||||||||
Sbjct 386922 GCTAAGCGTCATAGAAAAATTCTAAGAGATAACATTCAAGGTATCACTAAACCAGCTATC 386981
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
| | | || | | ||||| || || ||| | ||||| || | || ||||| ||
Sbjct 386982 AGAAGATTAGCAAGAAGAGGTGGTGTTAAACGTATTTCTGGTTTAATTTACGAAGAAGTT 387041
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
| | |||||| || | || | | |||| || |||||| | ||||| ||
Sbjct 387042 AGAGCTGTTTTAAAAACATTTTTAGAATCCGTCATTAGAGATGCTGTTACTTATACTGAA 387101
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || | |||||||| || ||| ||||| | || ||||| ||||| | |||||
Sbjct 387102 CACGCAAAGAGAAAGACTGTTACATCCTTGGATGTTGTTTATGCTTTGAAGAGACAAGGT 387161
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 387162 AGAACCTTGTATGGTTTCGGTGGTTAA 387188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075157941878
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |