Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq41 262 4e-65 >seq41 Length=1599359 Score = 262 bits (290), Expect = 4e-65 Identities = 612/914 (67%), Gaps = 15/914 (2%) Strand=Plus/Plus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 || |||||||| |||||| || ||||| || || ||||| || ||||||| || | Sbjct 1218669 TTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTT 1218728 Query 21245 TCCATAAAATCAAATGGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303 ||||| ||||||||||||||| | | || ||||| ||| || ||| | | ||| Sbjct 1218729 TCCATGAAATCAAATGGATTTGTAACGTTGAAATACTTT-TTGTTACCTAAAGCGACTAA 1218787 Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363 || |||||| || |||||||| | ||||| ||||| || ||||||||| | || Sbjct 1218788 TAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATAA 1218847 Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTAT 21423 ||| || | ||| | | ||| | |||||| || || ||||| || || Sbjct 1218848 CGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAAT 1218907 Query 21424 ATTTATTATCCTAGATG-TACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482 ||| ||| | |||| | || || || || || || | |||||| |||| Sbjct 1218908 CTTTTCTATAATTGATGGTTCT-GGTTTATTTTTCAAATGAGCGAATAACAAACAAGCAA 1218966 Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542 |||| ||| ||||||||||| || | || || ||||| ||||| || ||||| |||| Sbjct 1218967 AATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGCA 1219026 Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602 |||| || |||| ||||||||||| || | ||||| | || || |||||||| || | Sbjct 1219027 TTAAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCTT 1219086 Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATT 21662 ||| ||||||||||||||||||| |||| || | | | | |||| |||||| Sbjct 1219087 CAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGAATCCATC 1219146 Query 21663 TTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGA 21721 | |||||||| ||| ||||||||||| ||| |||| ||||| || || |||| Sbjct 1219147 TAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACAAGA 1219206 Query 21722 TGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAA 21781 || |||| | | || | || | || | |||||| Sbjct 1219207 -AATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGTCTCAGAA 1219265 Query 21782 TGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACC 21841 || |||||||| ||| || ||||| || |||||||| | || || | | |||||| Sbjct 1219266 TGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAACT 1219325 Query 21842 TCGGAATA-AAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAA 21900 || | | |||| | | |||| |||||||| || || |||||| ||||| ||||| Sbjct 1219326 TCTGCTGAGAAATTCTCTA-CCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAAAA 1219384 Query 21901 TGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCAATCTA 21956 |||||| | || || ||| ||| ||| || || ||| || || |||||||| Sbjct 1219385 TGCCAAGACCCTTGAAATGAAAAATCTTTCATTCTC-GTTCATTCTATTATTCCAATCAT 1219443 Query 21957 ATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTAT 22016 || ||| ||||| | ||| | |||||||| |||||||| ||| || | || | Sbjct 1219444 GTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCTTGT 1219503 Query 22017 ACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGAT-TCA 22075 | ||| || |||| |||| | |||||||||| ||||| || | |||| | || Sbjct 1219504 AAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCT-ATGTTTGTTCTCC 1219562 Query 22076 ACTAAAAGTGGTTC 22089 || || | |||||| Sbjct 1219563 ACCAATATTGGTTC 1219576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900494157040