Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq41 183 8e-41 seq27 168 2e-36 seq15 104 6e-17 >seq41 Length=1599359 Score = 183 bits (202), Expect = 8e-41 Identities = 605/925 (65%), Gaps = 43/925 (5%) Strand=Plus/Minus Query 22048 GAGAATAAAGATCGTTTCGTACTATTTCCGATTGTACACGAAGATATTTATGAAGAATAC 22107 ||||| ||| || | || || ||||||| || | | | || |||| ||| ||| Sbjct 1219561 GAGAACAAACATAGATTTGTTTTATTTCCAATCAAATATCATGAAATTTGGCAAGCTTAC 1219502 Query 22108 AAGAAAGCAGAAGCTTCCCTATGGGGTGTTTCCGAAATTGATATTTCCACTGATAAGACG 22167 |||| |||||||||||| | ||| || | ||||| ||| |||| | |||| Sbjct 1219501 AAGAGAGCAGAAGCTTCTTTTTGGACTGCTGAAGAAATCGATCTTTCAAAGGATATACAT 1219442 Query 22168 GATTGGCCAAA---ACTTACAGAAAACGAACAACATTTTAT--CAAATATATTCTAGCAT 22222 |||||| || | | | || || ||| | ||| || ||| | || |||| Sbjct 1219441 GATTGGAATAATAGAATGAACGAGAATGAAAGATTTTTCATTTCAAGGGTCTTG--GCAT 1219384 Query 22223 TCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCTGAAA 22282 | || || | | || ||||| ||| ||| ||| | || ||||| || | ||| Sbjct 1219383 TTTTCGCCGCTTCTGATGGTATCGTTAATGAAAATTTGGTAGAGAATTTCTCAGCAGAAG 1219324 Query 22283 TTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACG 22342 ||||| || || |||| ||||| ||||| | ||||| ||||| |||||| |||| Sbjct 1219323 TTCAAATTCCTGAAGCCAAGTGTTTTTATGGGTTTCAAATTATGATGGAAAATATTCATT 1219264 Query 22343 CGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGAAACT 22402 | || || || ||| | || | | ||| || | ||||| | || |||| | Sbjct 1219263 CTGAGACTTACTCTTTACTGATCGAT--ACTTATATCA----AAGACCCA-AAGGAAAGT 1219211 Query 22403 TATTCCGCG--CGAT----TCGC-ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCG 22455 ||| | | | || ||| | |||| | |||||| | || ||||| ||||| Sbjct 1219210 GATTTCTTGTTCAATGCTATCGATAATATTCCACAAATTAAAGAAAAAGCAGAATGGGCA 1219151 Query 22456 CTGAAATGGATGAA------CAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCT 22509 | | |||||| | ||||| | || |||| ||| | | ||||||||||| Sbjct 1219150 ATTAGATGGATTCAAGATAGCAATGCAATTT---TCGCTGAAAGATTAGTTGCATTTGCT 1219094 Query 22510 GTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGT 22569 | ||||||| |||||||| ||||| | ||| ||| ||||||||| |||| || Sbjct 1219093 GCAATTGAAGGTATTTTCTTCTCTGGTTCCTTTGCTGCTATCTTTTGGTTAAAGAAGAAG 1219034 Query 22570 GCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCAT 22629 | | ||||| ||| | || |||||||||||||| ||| || ||||||| ||| | ||| Sbjct 1219033 GGTTTAATGCCTGGTTTGACCTTTTCAAATGAGTTGATTTGCAGAGATGAAGGTTTACAT 1218974 Query 22630 ACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAAC---TTCCATATGAA 22686 || |||||||| ||| || ||| ||| |||| | | |||||| |||| | Sbjct 1218973 ACAGATTTTGCTTGTTTGTTAT-TCG--CTCATTTGAAAAATAAACCAGAACCAT---CA 1218920 Query 22687 ACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCG 22746 | | || | ||||| || | || |||||| ||||| || | | || || Sbjct 1218919 ATTATAGAAAAGATTATCACCGAAGCTGTTGAAATTGAAAAAAGATATTTCATGGATGCT 1218860 Query 22747 TTACCAGTAAGTC-TCATT-GGTATCAATGCCGAATCAATGAGTACATATATTAAATTTG 22804 || |||||| || | ||| ||||| |||||||| ||||| ||| || |||||| Sbjct 1218859 TTGCCAGTA--TCGTTATTGGGTATGAATGCCGATCTAATGAACCAATACGTTGAATTTG 1218802 Query 22805 TTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCAT 22864 | || ||| | |||||| | | | ||| | |||| ||| ||||| ||||||| Sbjct 1218801 TCGCTGATAGACTATTAGTCGCTTTAGGTAACAAAAAGTATTTCAACGTTACAAATCCAT 1218742 Query 22865 TTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTG 22924 |||| | |||||| |||||| | | || ||||| || |||||||| || |||||| Sbjct 1218741 TTGATTTCATGGAAAACATTTCATTGGCTGGTAAGACTAACTTCTTCGAGAAGAGAGTTT 1218682 Query 22925 GTGAATACCAAAAAGCAGGTGTTAT 22949 || || || || || ||||| || Sbjct 1218681 CCGATTATCAGAAGGCTGGTGTCAT 1218657 >seq27 Length=921605 Score = 168 bits (186), Expect = 2e-36 Identities = 1057/1669 (63%), Gaps = 68/1669 (4%) Strand=Plus/Minus Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 |||||||| ||| |||||| || || ||| | | ||| | || | ||||||||||| Sbjct 395898 AATGGTGAGGTTGCTGAACGTCCTCAACATTTAATCATGAGAGTATCAGTTGGTATCCAT 395839 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTG-CTCGTGTATT-CA 363550 | | ||| | | ||| || ||||| || || ||| | || || ||||| || Sbjct 395838 GGTACAGATATCAAGTCCGTTATAGAAACTTACAA-CTTG-ATGTCTCTAAGGTATTTCA 395781 Query 363551 CGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCT 363610 || || | ||||| | | ||| ||||| |||| | | ||||| |||||||| || | Sbjct 395780 TCCATGCATCTCCAACTTTATTCAACGCTGGTACTCCTCACCCACAAATGTCTTCATG-T 395722 Query 363611 TTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 ||||| || |||||||||||||| || || || || | ||| || | ||| | ||| Sbjct 395721 TTCTTAGTAGCTATGAAGGACGATTCTATTGAAGGAATTTATGATACCTTGAAGGAATGT 395662 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAG 363729 ||| | |||||||| | ||| || || ||||| || ||||| || ||||| | Sbjct 395661 GCTATGATTTCCAAAACTGCTGGTGGTATTGGGCTACATATCCATAACATTCGTTC---T 395605 Query 363730 AACAGT---TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 | | || |||||| || || || ||| || || | | |||||| |||| Sbjct 395604 ACCGGTTCCTACATTGCAGGTACTAATGGTACCTCTAACGGTTTAATCCCCATGATTCGA 395545 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGT 363844 || ||| |||||||||| | || |||||||| ||||| | |||| | ||| || | Sbjct 395544 GTCTTTAACAATACTGCTCGTTATGTCGACCAAGGTGGTAACAAAAGACC--AGGCGCTT 395487 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 ||||| | || || || || ||||| || ||||| || || |||| | | |||| Sbjct 395486 TTGCTTTATACCTTGAACCATGGCATGCAGACATTTTCGATTTCATTGATATTAGAAAAA 395427 Query 363905 A-CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 | ||| || || || ||| | ||||| | ||| | || ||||||||| || |||| Sbjct 395426 ATCAC-GGTAAGGAAGAAATTCGTGCCAGAGATTTATTTCCAGCACTTTGGATTCCTGAT 395368 Query 363964 CATTTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGAA 364020 || ||||| || || | | | ||| || ||| | | |||| ||| ||| Sbjct 395367 TTATTCATGAAACGTGTCCAAGAAAACGGTGAG---TGGACCTTGTTTTCTCCAAGTGAA 395311 Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 |||||| | | ||||| | | || || | | | |||||||| || | Sbjct 395310 GCGCCAGGTTTAGCTGATGTTTATGCCGAAGAGTTCGAAGAGTTATACGAACGTTACGTT 395251 Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 | ||||| | | | || || ||| || ||||| | |||| |||||| |||| Sbjct 395250 GCAGAGGGTCGCGGTAGAAAAACCATTAAAGCCCAGAAATTGTGGTACGCCATCTTGGAG 395191 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 | || | ||| || || || || | ||| | || || ||| | || ||| ||| Sbjct 395190 GCTCAAACTGAAACTGGTACCCCATTCATGCTATATAAGGATGCTTGTAACACGAAGAGT 395131 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGC----AACCTATGTACCGAGATTATTGA 364256 |||||| || | | ||||| || || | | ||| ||||| || ||| | || Sbjct 395130 AACCAGAAGAATTTAGGTACTAT----CAAATCTTCTAACTTATGTTGTGAAATTGTAGA 395075 Query 364257 ATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC--G 364314 |||| | ||||| || |||||||| || ||||| || || || || ||| | || | | Sbjct 395074 ATACTCTGCTCCAGATGAGACTGCTGTTTGTAATCTAGCTTCCATTGCGTTGCCATCCTG 395015 Query 364315 TTTGTAA-------AAGATGGTACTTTTGA-CCACCAGCAT--CTT---TATG----ACG 364357 | | || ||||||||| || ||| | || ||| || | ||| Sbjct 395014 TATTCAAACAGCGGAAGATGGTA----AGACCCAATGGTATAACTTTGCTAGGCTACACG 394959 Query 364358 TAA--CCTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412 || ||| | || |||| | ||| | |||| || || ||| || |||||||| Sbjct 394958 AAATTGCTAAGGTTAT--TACTCGTAATTTAAACAAAGTCATTGACCGTAACTATTATCC 394901 Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 | || |||||| | ||||| ||| | || | || || | ||| ||||| | || Sbjct 394900 AGTTATTGAAGCTAAAAACTCTAACATGAGGCACAGACCTATCGCTCTAGGTGTTAATGG 394841 Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTC- 364531 | ||||| || |||||| | | |||| || || | || || | | | Sbjct 394840 TTTGGCTGATACATTCATGATGTTACGTGTTCCATTCGAGTCTCAAGAGGC-CAAGAACT 394782 Query 364532 TAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGG 364591 | |||| | ||||||||||| || ||| |||||| || | || ||||| |||| Sbjct 394781 TGAATATTCAAATCTTTGAAACCATTTATCACGCCGCATTGGAATCATCCTGTGAATTGG 394722 Query 364592 CAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651 | ||| | || || || ||||| || || || |||| || || || | Sbjct 394721 CTCAAAAAGATGGTCCATATGAAACCTATGAAGGTTCTCCAGTTTCTCAAGGTGTTTTGC 394662 Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711 | | |||| | |||||| | |||| | | || ||| | ||||| || | | Sbjct 394661 AATATGATATGTGGAATACAAAGCCAACCGACCTCTGGGATTGGGACACTTTGAAACAGA 394602 Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771 | ||||| | ||||||| | || || || | || || ||||| || || || | Sbjct 394601 AAATTAAGGAACATGGTATCAGGAATTCTCTACTCTTGGCACCAATGCCAACTGCATCAA 394542 Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831 | | || || | ||| | || || || ||||| || || || || | ||||| | Sbjct 394541 CATCTCAAATTTTAGGATATAATGAATGTTTCGAGCCATTCACCTCGAACATGTATTCCC 394482 Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAG-GATCTTTCC 364890 | || ||| | || || ||||||| | |||||| ||| | || | | ||| | Sbjct 394481 GTCGTGTTTTGTCTGGTGAATTTCAAATCGTTAATCCGTA-TTTGTTACGTGATTTGGTT 394423 Query 364891 GACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTG 364950 || ||| | |||| ||| || ||||| | | |||||| | | ||||||||| | Sbjct 394422 GATTTGGGGATATGGGATGATAGTATGAAACAACACATCATCACAGACAATGGTTCTATT 394363 Query 364951 CAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATT 365010 || || | || |||| | || |||| | ||||| || || |||||||| Sbjct 394362 CAAAATCTACCTAACATTCCTCAGGAATTGAAAGAGCTATACAAGACTGTGTGGGAAATC 394303 Query 365011 TCCATGCGAAC-TCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATC 365058 | || ||| | ||||||| ||||| || || || | |||||||||| Sbjct 394302 T-CACAAAAACATATCATTGAAATGGCAGCTGACCGTGCTGCTTTTATC 394255 >seq15 Length=954869 Score = 104 bits (114), Expect = 6e-17 Identities = 202/288 (70%), Gaps = 8/288 (3%) Strand=Plus/Plus Query 111372 TGGTTTATTCGCGGAAGTACAAATGCAAATGAACTT-GCAGCAAAAAATGTAAAAATTTG 111430 ||||||||| ||| |||| ||| ||| ||| || |||| | | |||||| || || Sbjct 129384 TGGTTTATTTCAGGATGTACCGATGGAAA-GAAGTTAGCAGAACAGGGTGTAAAGATATG 129442 Query 111431 GGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACA-ACGAAGAAG 111489 ||| || |||||||| | || | ||||||| | | || || || | ||| |||| Sbjct 129443 GGAAGGCAATGGATCTAGGGAATATCTAGATAAATTGGGACTACATGAAAGACGG-GAAG 129501 Query 111490 GTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCA 111549 ||||| | ||||| |||||||| ||||||||| | || ||||| ||| | || || || | Sbjct 129502 GTGATTTAGGACCTGTTTACGGGTTTCAATGGAGGCATTTTGGAGCAAAGTATAAGAC-A 129560 Query 111550 TGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATT 111608 || | ||| || | || ||| ||| ||||||||| || | ||| | ||||| Sbjct 129561 TGTGATGACGATTACAGTGGCCAAGGAGTTGACCAATTACAGGATTTAATTACT-AAATT 129619 Query 111609 AAGAAC-AACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 || ||| || ||| | | | | | ||||||||||||||||| || Sbjct 129620 AAAAACGAATCCATATGATAGAAGACTAATTATGAGTGCATGGAATCC 129667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352831835972