Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq46 140 2e-28
seq15 122 6e-23
seq19 105 4e-18
seq43 95.1 8e-15
>seq46
Length=12037
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3246 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3187
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 3186 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3152
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 1281 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 1222
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 1221 GCCAATATTTAGCTTTA 1205
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 10292 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 10233
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 10232 GCCAATATTTAGCTTTA 10216
>seq15
Length=954869
Score = 122 bits (134), Expect = 6e-23
Identities = 159/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | ||| ||||| || | ||| || |||||||| ||||| ||||
Sbjct 83959 TACCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAG 83900
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||||| | | || || ||||| || || ||||| |||| | |||||| || | |
Sbjct 83899 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTG 83840
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||||||||| ||| || ||| ||||| | | ||| || | |||||
Sbjct 83839 GGATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 83780
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308
|||| || || || || ||||| ||||| ||||| |||||
Sbjct 83779 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAA 83740
>seq19
Length=616425
Score = 105 bits (116), Expect = 4e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||||||||| | ||| || || || | ||| |||||||| || |||||||||||
Sbjct 593006 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGA 593065
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | | || || || ||||| || ||||| || | | |||||| || | ||
Sbjct 593066 TAAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 593125
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| || || ||| ||||| | | ||| || | ||||||
Sbjct 593126 AATACCTTCCTTGTCTTGGATCTTAGACTTGACATTATCAATAGTGTCAGAAGATTCAAC 593185
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|||||| ||||| || ||||| ||||| ||||| || || || ||||| ||
Sbjct 593186 TTCTAAGGTAATGGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCATCTT 593236
>seq43
Length=816610
Score = 95.1 bits (104), Expect = 8e-15
Identities = 162/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | ||| | ||| ||||| || || ||| || ||||||||||| || ||||
Sbjct 812834 TACCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAG 812893
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| | | | || || | |||||| || || || || | | || || || | |
Sbjct 812894 ACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTG 812953
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || || |||||| |||||| || ||||| | | || || ||| |
Sbjct 812954 GAATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCA 813013
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTA 38323
| || || |||||||| ||||| ||||| ||||| ||||| || |||||||||||
Sbjct 813014 CCTCCAACGTAATAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCATGTTTTA 813068
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | ||| | ||| ||||| || || ||| || ||||||||||| || ||||
Sbjct 812606 TACCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAG 812665
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| | | | || || | |||||| || || || || | | || || || | |
Sbjct 812666 ACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTG 812725
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || || |||||| |||||| || ||||| | | || || ||| |
Sbjct 812726 GAATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCA 812785
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || |||||||| ||||| ||||| ||||| || ||||| |||||
Sbjct 812786 CCTCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCAT 812834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947012220226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |