Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq43 95.1 9e-15 >seq43 Length=816610 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 812834 ATGCAAATATTTGTCAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTGGAATCCTCG 812775 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || |||||| || || |||||| | || | |||| Sbjct 812774 GACACCATTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCACCAGACCAG 812715 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || || ||| Sbjct 812714 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 812655 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 812654 ATTCAAAAAGAATCCACACTGCACTTGGTCTT 812623 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 812606 ATGCAAATATTTGTCAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTGGAATCCTCG 812547 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || |||||| || || |||||| | || | |||| Sbjct 812546 GACACCATTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCACCAGACCAG 812487 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 812486 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 812427 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 812426 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 812395 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 809642 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 809583 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 809582 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 809523 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || || ||| Sbjct 809522 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 809463 Query 22014 ATTCAGAAGGAATCTAC 22030 ||||| || ||||| || Sbjct 809462 ATTCAAAAAGAATCCAC 809446 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 809870 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 809811 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 809810 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 809751 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 809750 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 809691 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 809690 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 809659 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 810098 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 810039 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 810038 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 809979 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 809978 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 809919 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 809918 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 809887 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 810326 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 810267 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 810266 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 810207 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 810206 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 810147 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 810146 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 810115 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 810554 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 810495 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 810494 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 810435 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 810434 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 810375 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 810374 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 810343 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 810782 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 810723 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 810722 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 810663 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 810662 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 810603 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 810602 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 810571 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 811010 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 810951 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 810950 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 810891 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 810890 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 810831 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 810830 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 810799 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 811238 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 811179 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 811178 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 811119 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 811118 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 811059 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 811058 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 811027 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 811466 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 811407 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 811406 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 811347 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 811346 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 811287 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 811286 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 811255 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 811694 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 811635 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 811634 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 811575 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 811574 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 811515 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 811514 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 811483 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 811922 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 811863 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 811862 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 811803 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 811802 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 811743 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 811742 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 811711 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 812150 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 812091 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 812090 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 812031 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 812030 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 811971 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 811970 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 811939 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || || ||||| |||| |||| || | Sbjct 812378 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 812319 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || |||||| | || | |||| Sbjct 812318 GACACCACTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 812259 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || ||||| |||||||| || ||| | |||| || | || | ||| Sbjct 812258 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCATAACTCTGTCTGACTCTAAT 812199 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || ||||| || || || |||| || Sbjct 812198 ATTCAAAAAGAATCCACACTGCACGTGGTCTT 812167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124599226284