Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq43 95.1 3e-14 >seq43 Length=816610 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| ||||||||||| | || || | || || || | |||||| || ||||| Sbjct 809223 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 809282 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | ||| || ||| || || || || || || ||||| | ||| ||||| Sbjct 809283 AATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATTTTAGATTTGACGTT 809342 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| || || || ||||| ||||| || |||| ||| ||||| Sbjct 809343 ATCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGAC 809402 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 809403 AAAGATTTGCAT 809414 Score = 91.5 bits (100), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| ||||||||||| | || || | || || || | |||||| || ||||| Sbjct 809451 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 809510 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||| || |||||| || || || || ||||| ||||| | ||| || Sbjct 809511 AATCAATCTCTGCTG---GTCTGGGGGAATACCCTCCTTGTCCTGAATTTTAGATTTGAC 809567 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | | || ||||| || || | ||| || |||||||| |||| || || Sbjct 809568 ATTGTCAGTGGTGTCCGAGGATTCCACCTCCAACGTAATAGTCTTCCCTGTCAACGTTTT 809627 Query 288459 GACGAATATCTGCAT 288473 ||| ||||| ||||| Sbjct 809628 GACAAATATTTGCAT 809642 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| ||||||||||| | || || | || || || | |||||| || ||||| Sbjct 812643 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 812702 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | ||| || ||| || || || || ||||| ||||| | ||| || || Sbjct 812703 AATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATTTTAGATTTGACATT 812762 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| || || | ||| || ||||| || |||| || ||||| Sbjct 812763 GTCAATGGTGTCCGAGGATTCCACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTGAC 812822 Query 288462 GAATATCTGCAT 288473 ||||| ||||| Sbjct 812823 AAATATTTGCAT 812834 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| ||||||||||| | || || | || || || | |||||| || ||||| Sbjct 812871 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 812930 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | ||| || ||| || || || || ||||| ||||| | ||| || || Sbjct 812931 AATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATTTTAGATTTGACATT 812990 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| || || | ||| || ||||| || |||| || || || Sbjct 812991 GTCAATGGTGTCCGAGGATTCCACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTAAC 813050 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 813051 GAAGATTTGCAT 813062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653704741188