Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq43 95.1 3e-14
>seq43
Length=816610
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| ||||||||||| | || || | || || || | |||||| || |||||
Sbjct 809223 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 809282
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | ||| || ||| || || || || || || ||||| | ||| |||||
Sbjct 809283 AATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATTTTAGATTTGACGTT 809342
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || ||||| || || || ||||| ||||| || |||| ||| |||||
Sbjct 809343 ATCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGAC 809402
Query 288462 GAATATCTGCAT 288473
|| || |||||
Sbjct 809403 AAAGATTTGCAT 809414
Score = 91.5 bits (100), Expect = 3e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| ||||||||||| | || || | || || || | |||||| || |||||
Sbjct 809451 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 809510
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||| || |||||| || || || || ||||| ||||| | ||| ||
Sbjct 809511 AATCAATCTCTGCTG---GTCTGGGGGAATACCCTCCTTGTCCTGAATTTTAGATTTGAC 809567
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || | | || ||||| || || | ||| || |||||||| |||| || ||
Sbjct 809568 ATTGTCAGTGGTGTCCGAGGATTCCACCTCCAACGTAATAGTCTTCCCTGTCAACGTTTT 809627
Query 288459 GACGAATATCTGCAT 288473
||| ||||| |||||
Sbjct 809628 GACAAATATTTGCAT 809642
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| ||||||||||| | || || | || || || | |||||| || |||||
Sbjct 812643 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 812702
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | ||| || ||| || || || || ||||| ||||| | ||| || ||
Sbjct 812703 AATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATTTTAGATTTGACATT 812762
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || ||||| || || | ||| || ||||| || |||| || |||||
Sbjct 812763 GTCAATGGTGTCCGAGGATTCCACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTGAC 812822
Query 288462 GAATATCTGCAT 288473
||||| |||||
Sbjct 812823 AAATATTTGCAT 812834
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| ||||||||||| | || || | || || || | |||||| || |||||
Sbjct 812871 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 812930
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | ||| || ||| || || || || ||||| ||||| | ||| || ||
Sbjct 812931 AATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATTTTAGATTTGACATT 812990
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || ||||| || || | ||| || ||||| || |||| || || ||
Sbjct 812991 GTCAATGGTGTCCGAGGATTCCACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTAAC 813050
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 813051 GAAGATTTGCAT 813062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653704741188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |